Pairwise Alignments

Query, 421 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 596 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 74/312 (23%), Positives = 120/312 (38%), Gaps = 57/312 (18%)

Query: 155 ISSQAAQAGGVTTERAGPAVLGETLPLSGRVEITPEGQAEVFARYPGRIVSLNVQL-GQR 213
           +S  A Q   + T   G     +T+ L+G+V+      +   +  PGRI  LNV   G+ 
Sbjct: 92  MSPTAMQLADIRTATVGTMDPVKTVRLNGKVQEDERLVSSQSSHIPGRIERLNVNFTGEY 151

Query: 214 VSRGQVLARV-----------------------------------------------ESS 226
           V RGQV+A +                                               ES 
Sbjct: 152 VRRGQVIAYIYSPDLVTAQEELFEAQKIKDTQPQLFKSARAKLKNWKLSDGQIDKILESG 211

Query: 227 ESLQTYSVTAPISGVITTKNANPGQITGNGPPMLTIGDPTRLHAEFFLYPRDAERVRVGQ 286
                + +TA ISG + +KN N G     G P+  I + +R+   F +Y  D   +  G 
Sbjct: 212 TPSDEFPITADISGYVLSKNVNVGDYIKRGEPIYEIANLSRVWVLFDVYESDMPWINKGD 271

Query: 287 RVE--LKSLAGEHTATGVIEAILPSDDVLSQTLVAHVELPYQGGVWRPGLGVEGVVQVGA 344
           +V   ++SL G+ T    I  + P  +  ++   A VE+P +    +P +   G V+   
Sbjct: 272 QVRFTVQSLPGQ-TFESKISFLDPVINPKTRVAKARVEVPNKDNQLKPEMFASGTVEATL 330

Query: 345 GEVP--LAVKTKGLQPFRDFTVVYAK----VGDTYEVRMLELGRRTDEWTEVLGGIEPGT 398
            +    + V    +      +VVY K     G ++ +R + LG    +   V  G+E G 
Sbjct: 331 PKKSNNVIVPKTAVMWTGKRSVVYVKNTSGSGVSFMMRDVTLGPGLGDSFIVESGLEEGE 390

Query: 399 TYVVDGAFLIRA 410
              V+G F I A
Sbjct: 391 EIAVNGTFSIDA 402