Pairwise Alignments

Query, 421 a.a., efflux RND transporter periplasmic adaptor subunit from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 1/172 (0%)

Query: 234 VTAPISGVITTKNANPGQITGNGPPMLTIGDPTRLHAEFFLYPRDAERVRVGQRVELKSL 293
           + AP  GV+  +  + G +      +  I +   +  EF +  R A +V+VG  +E  + 
Sbjct: 173 IKAPFDGVLGLRQISAGSVISTTDIIANIVNIDPIKIEFSIPERYASQVQVGSTIEFSNN 232

Query: 294 AGEHTATGVIEAILPSDDVLSQTLVAHVELPYQGGVWRPGLGVEGVVQVGAGEVPLAVKT 353
           A      G + A  P  D  ++TL      P +   + PG+ V     +   E  L V +
Sbjct: 233 ASHGLKKGKVYAYEPVIDANTRTLTLRAISPNEDRKFLPGMFVNIRFNLEVEEDALLVPS 292

Query: 354 KGLQP-FRDFTVVYAKVGDTYEVRMLELGRRTDEWTEVLGGIEPGTTYVVDG 404
           + L P    + +         + R +++G RTD   ++L G+ PG   +  G
Sbjct: 293 QSLIPELNGYKLFLVNQEGIVQERQVQIGIRTDSEVQILDGLSPGEMVLTTG 344



 Score = 27.3 bits (59), Expect = 8e-04
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 5/77 (6%)

Query: 188 TPEGQAEVFARYPGRIVSLNVQLGQRVSRGQVLARVESSESLQTYSVTAPISGVITTKNA 247
           +P+   E     P  +V +  +  +  +   V   V S+ES+   S+ A I+G++ + N 
Sbjct: 38  SPQSTPEAMTALPVDVVEVTPE--RLENNLNVTGNVLSNESV---SLRAEITGLVESINF 92

Query: 248 NPGQITGNGPPMLTIGD 264
             GQ    G P++ + D
Sbjct: 93  EEGQFVKKGTPLVYLND 109