Pairwise Alignments

Query, 1117 a.a., error-prone DNA polymerase from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 1160 a.a., DNA polymerase III alpha subunit from Escherichia coli BL21

 Score =  340 bits (872), Expect = 4e-97
 Identities = 306/1117 (27%), Positives = 506/1117 (45%), Gaps = 96/1117 (8%)

Query: 1    MTAPAYAELATASNFSFLRGASHPKDLVLTAILRGHSGLGLADRNTVSGVVRAWSALRTI 60
            M+ P +  L   S++S + G +    LV  A   G   L + D   + G+V+ + A    
Sbjct: 1    MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGA---- 56

Query: 61   REDGLSPPDVVRDGGGPGEVIYVEDPLNDPALSQMVKDRAATFKLATGARLVFNDGTPDI 120
                         G G G    V                 A F +      +  D    +
Sbjct: 57   -------------GHGAGIKPIV----------------GADFNVQCD---LLGDELTHL 84

Query: 121  IAYPETRAGWGRLTRLLTLGNRRAVKGQCEIGLRDLLAASEDLLLIL----MPD---ARL 173
                    G+  LT L++   +R       I  RD L    + L++L    M D   + L
Sbjct: 85   TVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLL 144

Query: 174  DG----VDKVLAQLTDASPGAVWLGAVMGRKGDDRRRLSRLKTLSERSGAPLLAVNNVLY 229
             G    VD+ +A   +  P   +L  +   + D+   L     L+E  G P++A N+V +
Sbjct: 145  RGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRF 204

Query: 230  HDAIQRDLQDVLTCIREGVTIEDAGRRLNANAERWLKPPAEMARLFRDAPEALVETQHVL 289
             D+   D  ++   I +G T++D  R  N + +++++   EM  LF D PEAL  T  + 
Sbjct: 205  IDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIA 264

Query: 290  SRIGFDLGDISYQYPEETTPPDETPQGWLEQLTWRHAEMR----YPDGVPHKVKAL---- 341
             R    +    Y  P+  T  D + + +L +      E R    +PD    +VK      
Sbjct: 265  KRCNVTVRLGEYFLPQFPTG-DMSTEDYLVKRAKEGLEERLAFLFPDE-EERVKRRPEYD 322

Query: 342  --LDKELIFIAKAGYAPYFLTIYDIVRVANDKRI-LCQGRGSAANSAVCYVLGITAVDPA 398
              L+ EL  I + G+  YFL + + ++ + D  + +  GRGS A S V Y L IT +DP 
Sbjct: 323  ERLETELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPL 382

Query: 399  ESDLLFERFLSTDRGEPPDIDVDFEHERREEIIQHIYTRYGRARAGIAATVIRYRPKSAI 458
            E DLLFERFL+ +R   PD DVDF  E+R+++I+H+   YGR       T      K+ I
Sbjct: 383  EFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVI 442

Query: 459  RDVGKALGLT---EDVTARLASSQWGSWGSEIGERHVKQAGLDPANPMIQRAVKLAMRLL 515
            RDVG+ LG      D  ++L     G   ++  E   +   +  A+  ++  + +A +L 
Sbjct: 443  RDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLE 502

Query: 516  NFPRHLSQHVGGFVLTQDRLDELVPIGNAAMPDRTFIEWDKDDIDALRLMKVDVLALGML 575
               R+  +H GG V+   ++ +  P+           ++DK D++   L+K D L L  L
Sbjct: 503  GVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTL 562

Query: 576  TCIRKAFDLI---RAHHGD-DWALHTIPRDDPAVYDMLCKGDSIGVFQVESRAQINMLPR 631
            T I  A ++I   RA +G+    +  IP DD   +DML + ++  VFQ+ESR   +++ R
Sbjct: 563  TIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKR 622

Query: 632  LKPRRLYDLVIQVAIVRPGPIQGDMVHPYLRRRNGLEEPEYSKPGPQYPHDELEQVLKKT 691
            L+P    D++  VA+ RPGP+Q  MV  ++ R++G EE  Y  P  Q+ H+ L+ VL+ T
Sbjct: 623  LQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISY--PDVQWQHESLKPVLEPT 680

Query: 692  LGVPLFQEQAMKVAMVAAEFNEKEANGLRKAMGTFRGDGTLHNYEDRMVGRMIERGYDPT 751
             G+ L+QEQ M++A V + +    A+ LR+AMG  + +  +            + G +  
Sbjct: 681  YGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPE-EMAKQRSVFAEGAEKNGINAE 739

Query: 752  FAQRCFDQIKGFGSYGFPESHAASFAQLVYVSSWIKHHYPAAFACALLNSQPMGFYAPAQ 811
             A + FD ++ F  YGF +SH+A++A + Y + W+K HYPA F  A++ +          
Sbjct: 740  LAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVG 799

Query: 812  LVRDAREHGVEVRPVDVSYSGWNNSLEGSDRTPALRIGLRQIEGFREDWAEALAAAR--- 868
            LV +    G+++ P D++ SG  +     D    +  G+  I+G  E   EA+  AR   
Sbjct: 800  LVDECWRMGLKILPPDIN-SGLYHFHVNDD--GEIVYGIGAIKGVGEGPIEAIIEARNKG 856

Query: 869  AFSLSNIETLAR--RAALSSAAMRKLADADAFRSLGLDRREALW-----AVRRLPDDAPL 921
             +     +  AR     L+   + KL  + AF  LG   R AL      A++     A  
Sbjct: 857  GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLG-PHRAALMNSLGDALKAADQHAKA 915

Query: 922  PLFAAADARELGAEPDARL-----PVMPLGEHVAAD--YQTLRLSLKAHPM-AILRPIFE 973
                 AD   + AE   ++        P  E V  D   +TL L L  HP+   L+ I  
Sbjct: 916  EAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIER 975

Query: 974  AEGLLNCAQTDARRGGALVRVAGVVLVRQ--RPGKGNAIFV-TLEDETGIINVVLWARMF 1030
              G +          G ++  AG+V+  +     +GN I + TL+D +G + V+L+    
Sbjct: 976  YVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDAL 1035

Query: 1031 EQFRREVMAARLMAVEGVVEKSP-EGVVHLVARRVID 1066
            +++++ +   R++ V G V      G + + AR V+D
Sbjct: 1036 DKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMD 1072