Pairwise Alignments

Query, 1117 a.a., error-prone DNA polymerase from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 1087 a.a., DNA polymerase III, alpha chain from Agrobacterium fabrum C58

 Score =  956 bits (2471), Expect = 0.0
 Identities = 525/1099 (47%), Positives = 699/1099 (63%), Gaps = 63/1099 (5%)

Query: 5    AYAELATASNFSFLRGASHPKDLVLTAILRGHSGLGLADRNTVSGVVRAWSALRTIREDG 64
            +YAEL   ++FSFLRGAS  ++L  TA   G   LG+ DRN+++G+VRA  A        
Sbjct: 2    SYAELQVTTHFSFLRGASSAQELFETAKALGIEALGVVDRNSLAGIVRALEA-------- 53

Query: 65   LSPPDVVRDGGGPGEVIYVEDPLNDPALSQMVKDRAATFKLATGARLVFNDGTPDIIAYP 124
                                              RA   +L  G RL   DG   ++ YP
Sbjct: 54   ---------------------------------SRATGLRLVIGCRLDLADGM-SVLVYP 79

Query: 125  ETRAGWGRLTRLLTLGNRRAVKGQCEIGLRDLLAASEDLLLILMPDARLDGVDKVLAQLT 184
              RA + RLTRL+TLG  R  K  C +   D++A ++ ++ IL+PD   D     L ++ 
Sbjct: 80   TDRAAYSRLTRLITLGKSRGGKNNCLLHWDDVVAYTDGMIGILVPDLPDDLCGIQLRKMA 139

Query: 185  DASPGAVWLGAVMGRKGDDRRRLSRLKTLSERSGAPLLAVNNVLYHDAIQRDLQDVLTCI 244
            +      ++   + R+ +D+ RL  +  L+ R     +  N+VL+H+  +R LQD++TCI
Sbjct: 140  ELFGDRAYVSLCLRRRQNDQLRLHEISNLATRFKVRTVVTNDVLFHEPGRRQLQDIVTCI 199

Query: 245  REGVTIEDAGRRLNANAERWLKPPAEMARLFRDAPEALVETQHVLSRIGFDLGDISYQYP 304
            R   TI++ G     +A+R+LKPP EM RLF    +AL  T  ++ R  F L +++YQYP
Sbjct: 200  RTRTTIDEVGFERERHADRYLKPPEEMERLFPRYRQALARTMEIVRRCTFSLEELTYQYP 259

Query: 305  EETTPPDETPQGWLEQLTWRHAEMRYPDGVPHKVKALLDKELIFIAKAGYAPYFLTIYDI 364
            EE   P +  Q  LE   W+    RYP+G+P  V  ++  EL  I    YAPYFLT++ I
Sbjct: 260  EEAIVPGKDAQASLEHYVWQCVPDRYPEGLPPDVLKVVRHELDLIRTMKYAPYFLTVFSI 319

Query: 365  VRVANDKRILCQGRGSAANSAVCYVLGITAVDPAESDLLFERFLSTDRGEPPDIDVDFEH 424
            VR A  + ILCQGRGSAANSAVCY+LGIT++DP+ +DLLFERF+S +R EPPDIDVDFEH
Sbjct: 320  VRYARSQGILCQGRGSAANSAVCYILGITSIDPSTNDLLFERFVSQERDEPPDIDVDFEH 379

Query: 425  ERREEIIQHIYTRYGRARAGIAATVIRYRPKSAIRDVGKALGLTEDVTARLASSQWGSWG 484
            ERREE+IQ IY  Y R +A + ATV RYR + AIRDVGKALGL EDV   L+S  W SW 
Sbjct: 380  ERREEVIQWIYRTYTREKAALCATVTRYRARGAIRDVGKALGLPEDVIKALSSGMW-SWS 438

Query: 485  SEIGERHVKQAGLDPANPMIQRAVKLAMRLLNFPRHLSQHVGGFVLTQDRLDELVPIGNA 544
             E+ +R+V++  L+P +  +   +KLA +L+  PRHL QH GGFVLT DRLD+LVPI  A
Sbjct: 439  EEVCDRNVRELNLNPDDRRLVLTLKLAQQLMGAPRHLGQHPGGFVLTHDRLDDLVPIEPA 498

Query: 545  AMPDRTFIEWDKDDIDALRLMKVDVLALGMLTCIRKAFDLIRAHHGDDWALHTIPRDDPA 604
             M DR  IEWDKDD++AL+ MKVD+LALGMLTC+ KAFDLIR H   D  L  I ++D  
Sbjct: 499  TMKDRQIIEWDKDDVEALKFMKVDILALGMLTCMAKAFDLIREHKDRDLDLSKIEQEDSV 558

Query: 605  VYDMLCKGDSIGVFQVESRAQINMLPRLKPRRLYDLVIQVAIVRPGPIQGDMVHPYLRRR 664
             Y M+ K D++G FQ+ESRAQ+ MLPRLKPR  YDLV+QVAIVRPGPIQGDMVHPYLRRR
Sbjct: 559  TYAMIRKADTLGTFQIESRAQMAMLPRLKPRTFYDLVVQVAIVRPGPIQGDMVHPYLRRR 618

Query: 665  NGLEEPEYSKPGPQYPHDELEQVLKKTLGVPLFQEQAMKVAMVAAEFNEKEANGLRKAMG 724
             G E  EY  P       ELE VL KTLGVPLFQE AM+VAMV A F   EA+ LRK+M 
Sbjct: 619  EGKEAVEYPTP-------ELEAVLGKTLGVPLFQESAMRVAMVCAGFTGGEADQLRKSMA 671

Query: 725  TFRGDGTLHNYEDRMVGRMIERGYDPTFAQRCFDQIKGFGSYGFPESHAASFAQLVYVSS 784
            TF+  G +  ++D++V  M+  GY P FA++ F Q++GFGSYGFPESHAASFA + Y SS
Sbjct: 672  TFKFTGGVSQFKDKLVSGMVRNGYAPEFAEKTFSQLEGFGSYGFPESHAASFALIAYASS 731

Query: 785  WIKHHYPAAFACALLNSQPMGFYAPAQLVRDAREHGVEVRPVDVSYSGWNNSLE--GSDR 842
            +IK HYP AF  AL+NSQPMGFYAPAQ+V DAR HGVEVRPV ++ S W+ +LE  G+  
Sbjct: 732  YIKCHYPEAFCAALINSQPMGFYAPAQIVGDARAHGVEVRPVCINRSRWDCTLERIGNSD 791

Query: 843  TPALRIGLRQIEGFR-EDWAEALAAARAFSLSNIETLARRAALSSAAMRKLADADAF-RS 900
              A+R+G RQ++G    D A  +AA    +  +++ + RR+ + S A+ +LA ADAF  S
Sbjct: 792  RHAVRLGFRQVKGLAVADAARVVAARMNNAFVSVDDMWRRSGVPSEALVQLAKADAFLPS 851

Query: 901  LGLDRREALWAVRRLPDDAPLPLFAAADARELGA-----EPDARLPVMPLGEHVAADYQT 955
            L L+RR+ALWA++ L D+ PLPLFAAA  RE+ A     EP   L  M  G +V  DY  
Sbjct: 852  LKLERRDALWAIKALRDE-PLPLFAAAAEREMAAIAEQQEPGVALRQMTDGHNVIEDYSH 910

Query: 956  LRLSLKAHPMAILRPIFEAEGLLNCAQTDARRGGALVRVAGVVLVRQRPGKGNAI-FVTL 1014
              L+L+ HP+A LR       ++ CA+    R G  V  AG+VLVRQ+PG    + F+T+
Sbjct: 911  TGLTLRQHPIAFLRKDLSVRNIITCAEAMNSRDGRWVYTAGLVLVRQKPGSAKGVMFITI 970

Query: 1015 EDETGIINVVLWARMFEQFRREVMAARLMAVEGVVEKSPEGVVHLVARRVIDRSSELSRL 1074
            EDETG  N+V+W  +FE+ RR V+ + +MA+ G +++  E VVHLVA+++ D S +L+ L
Sbjct: 971  EDETGPANLVVWPTLFEKRRRAVLGSSMMAINGRIQREGE-VVHLVAQQLFDLSGDLTGL 1029

Query: 1075 S-QEHDTAVQLARADVVAH 1092
            + ++ +  +   R D  AH
Sbjct: 1030 ADRDEEFKLPAGRGDEFAH 1048