Pairwise Alignments

Query, 479 a.a., YncE family protein from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 329 a.a., putative Outer membrane protein from Pseudomonas putida KT2440

 Score = 84.0 bits (206), Expect = 7e-21
 Identities = 79/313 (25%), Positives = 143/313 (45%), Gaps = 26/313 (8%)

Query: 45  ADQFSNTVSVVDPSTNGLLGVISLGEPTPANLSPLYKGQLLVHGIGAAPDGKTIAVVSIG 104
           +++  N++S++D  T      + + E  P    P  +G LL H      D K + + +  
Sbjct: 35  SNEKDNSLSLIDLQT------LEVTETLPVGQRP--RGLLLSH------DSKLLYICASD 80

Query: 105 SNSVSFIDTASNTVKHTTYVGRSPHEAFFTPDGREVWVTVRGEAYVSVLDAATYQETARV 164
           S+ V  +D A+  +      G+ P +    P+ R ++V+   +A V+V+D  T +   ++
Sbjct: 81  SDRVQVMDVATRKIIKELPSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLGQI 140

Query: 165 ETPNGPGMTIFSPDGRYAYICSSFSPETVVVETATRQIVGR--VAQASPFCPDIAATPDG 222
           E    P     SPDG++A   S  +     ++T+T+ +     V Q   F   +  + DG
Sbjct: 141 EVGIEPEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRF---VEFSKDG 197

Query: 223 SQVWMTLKDVGKTMVFNARPPFAVLQTLDTGPLTNH------VNIVRNAAGQFAYVTVGT 276
           S++W +  ++G T+         VL+TL+      H      V I  +A G++A+V +G 
Sbjct: 198 SRLWAS-AEIGGTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADGKYAFVALGP 256

Query: 277 ENRVKVYRTDTFTLVTEIEVGSLPHGLWPSGDGSRIYVGLENGDGVAVIDTLANRVIATV 336
            N V V    TF ++  + VG     L  + D S++         V+VID    +V+ +V
Sbjct: 257 ANHVAVIDAKTFDVLDYLLVGRRVWQLAFTPDQSQLLATNGVSGDVSVIDAKQLKVLKSV 316

Query: 337 PIGQGPQGVTYVP 349
            +G+ P GV   P
Sbjct: 317 KVGRYPWGVVVTP 329



 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 27/247 (10%)

Query: 17  AGHALADQVPGAAAAPAIPISSQDRF-YSADQFSNTVSVVDPSTNGLLGVISLG-EPTPA 74
           A   +  ++P         +   DR+ Y +++    V+V+D  T+ +LG I +G EP   
Sbjct: 90  ATRKIIKELPSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLGQIEVGIEP--- 146

Query: 75  NLSPLYKGQLLVHGIGAAPDGKTIAVVSIGSNSVSFIDTASNTVKHTTYVGRSPHEAFFT 134
                        G+  +PDGK     S  +N + +IDT++ T+  +T V + P    F+
Sbjct: 147 ------------EGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFS 194

Query: 135 PDGREVWVTVRGEAYVSVLDAATYQ--ETARVETPN------GPGMTIFSPDGRYAYICS 186
            DG  +W +      V++LD  T Q  +T   +          P     S DG+YA++  
Sbjct: 195 KDGSRLWASAEIGGTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADGKYAFVAL 254

Query: 187 SFSPETVVVETATRQIVGRVAQASPFCPDIAATPDGSQVWMTLKDVGKTMVFNARPPFAV 246
             +    V++  T  ++  +         +A TPD SQ+  T    G   V +A+    V
Sbjct: 255 GPANHVAVIDAKTFDVLDYLLVGRRVW-QLAFTPDQSQLLATNGVSGDVSVIDAK-QLKV 312

Query: 247 LQTLDTG 253
           L+++  G
Sbjct: 313 LKSVKVG 319



 Score = 57.0 bits (136), Expect = 9e-13
 Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 8/230 (3%)

Query: 141 WVTVRGEAYVSVLDAATYQETARVETPNGPGMTIFSPDGRYAYICSSFSPETVVVETATR 200
           WV+   +  +S++D  T + T  +     P   + S D +  YIC+S S    V++ ATR
Sbjct: 33  WVSNEKDNSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDVATR 92

Query: 201 QIVGRVAQASPFCPDIAATPDGSQVWMTLKDVGKTMVFNARPPFAVLQTLDTGPLTNHVN 260
           +I+  +          A  P+   ++++ +D     V +      VL  ++ G       
Sbjct: 93  KIIKELPSGKD-PEQFALHPNDRWLYVSNEDDALVTVIDTVTD-KVLGQIEVG--IEPEG 148

Query: 261 IVRNAAGQFAYVTVGTENRVKVYRTDTFTLVTEIEVGSLPHGLWPSGDGSRIYVGLENGD 320
           +  +  G++A  T  T N +    T T TL     V   P  +  S DGSR++   E G 
Sbjct: 149 MAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFSKDGSRLWASAEIGG 208

Query: 321 GVAVIDTLANRVIATVPI---GQGPQGVTYVPRAVTQGDGRANLTPLGAA 367
            V ++D    +V+ T+     G  P  V  V   ++  DG+     LG A
Sbjct: 209 TVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLS-ADGKYAFVALGPA 257



 Score = 40.8 bits (94), Expect = 7e-08
 Identities = 20/74 (27%), Positives = 36/74 (48%)

Query: 270 AYVTVGTENRVKVYRTDTFTLVTEIEVGSLPHGLWPSGDGSRIYVGLENGDGVAVIDTLA 329
           A+V+   +N + +    T  +   + VG  P GL  S D   +Y+   + D V V+D   
Sbjct: 32  AWVSNEKDNSLSLIDLQTLEVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDVAT 91

Query: 330 NRVIATVPIGQGPQ 343
            ++I  +P G+ P+
Sbjct: 92  RKIIKELPSGKDPE 105