Pairwise Alignments

Query, 333 a.a., transposase, IS116/IS110/IS902 family from Bacteroides ovatus ATCC 8483

Subject, 329 a.a., IS110 family transposase from Dickeya dadantii 3937

 Score =  108 bits (269), Expect = 2e-28
 Identities = 91/324 (28%), Positives = 158/324 (48%), Gaps = 20/324 (6%)

Query: 5   WFIGIDISKKTLDVVIYVPTKKHADETNYERFLNKEEGYKSLLCWLKKKNMAKKRLVISM 64
           +++GIDISK+ +DV +     K   +T  +   N     ++L  WL ++     +  I M
Sbjct: 2   YYVGIDISKRVVDVCLLADGIKGKRKT--KTLPNGPNAVQALAEWLTRQKCEPSQAHIIM 59

Query: 65  ENTGIYSFDLCLFLEAASIDYCSFNPLHLK---RSLGLVRGKNDRVDAERIAYFAYLHRD 121
           E TG+Y   L   L  + I     NP  L+   R +G++  K D+VDA  +A +  L + 
Sbjct: 60  EATGVYHEHLAYGLHHSGIAVSVINPHRLREFARGMGILT-KTDKVDACVLACYGCLRQP 118

Query: 122 ELSYSKLSGS-----SIIRLRD-FAAERKRFVKQQAEYKGFLTDRKDCEMTSTIERAAHM 175
           E  ++  S       ++++ RD    +++R   + +     LT     E+ +++E    M
Sbjct: 119 E-GWTPPSPEIRKLRALLQHRDSLLGDKQRLENRLSTLNATLTTE---EVVTSLES---M 171

Query: 176 VKILDEEIASVEEEMLQIINSDPSILRNYELLNSIKGIGTINAMNTIIHTNNFQAFETAR 235
           V+ +  E+  +E  +   I+  P +  + +LL SI G+G     N ++ T     F +A 
Sbjct: 172 VQHVKGELERIERLIEDHIDRHPGLKNDLKLLKSIDGVGDQIGWN-MLATIRGSNFRSAE 230

Query: 236 QYACYLGIAPFEHSSGTSIKGKTRVYPTGAKLLKADLSQAANSAIVWDKEMKEYYERKRK 295
           Q A YLG+ P E  SGTS++G+ R+   G   ++A L   A +AI  ++ +K  YER   
Sbjct: 231 QVAAYLGVIPVERRSGTSVRGRARLSKIGPPAIRAKLYMGAIAAISHNRHVKAQYERLLL 290

Query: 296 EGKAYGVVLNAVKFKLVGRMFAVV 319
           +GKA  + + A   KLV   + V+
Sbjct: 291 KGKAKMLAIGAAMRKLVHLCYGVL 314