Pairwise Alignments

Query, 550 a.a., ABC transporter substrate-binding protein from Bosea sp. OAE506

Subject, 502 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  127 bits (320), Expect = 8e-34
 Identities = 139/542 (25%), Positives = 225/542 (41%), Gaps = 61/542 (11%)

Query: 17  STALVTGALAQEKVLRIGMTA-ADIPRTHGQPDQGFEGNRFTGIPMYDALTHWDLSSADK 75
           S  L   AL+ E  LRIG+   AD+      P Q      F G  +Y A+    L    +
Sbjct: 14  SAVLAVPALSSE--LRIGLNDDADVL----DPAQS---RTFVGRIVYTAMCD-KLVDISQ 63

Query: 76  ASVVIPGLATEWAVDAADKTKWTFKLRPGVKFQDGSDFNAAAVVWNVDKVLNKEAAHFAP 135
              ++P LATEWA     K   T K+R GVKF DG   +AAAVV  +++ +    +    
Sbjct: 64  DMKIVPQLATEWAWSEGGKVL-TMKIRDGVKFHDGETLDAAAVVATIERNMTLPESR--- 119

Query: 136 DQIGVTVSRMPTLKSARAIDPLTVELTTSEPDAFLPINLTNLFMASPAHWAAKLAAVPAS 195
                  S + +++   A  PL V+ T   PD  L   L++          A +   P +
Sbjct: 120 -----RKSELSSVEKVEATGPLDVKFTLKTPDVTLLAQLSD---------RAGMIVAPKA 165

Query: 196 VADPAERAKQAWAAFSADPSGTGPFKGVKLSPRERFEMVANKAYWDPKRVPKIDRVVLLP 255
                  AK+  A F + P   GPFK V+   ++R  +     YWD  ++  +D++V LP
Sbjct: 166 -------AKELGANFGSKPVCAGPFKFVERIQQDRIVLEKFADYWDKDKI-LVDKIVYLP 217

Query: 256 LPEANARTAALLSGQVDWIESPSPDAVPQIKQRGFTVYTNA-QPHVWPWQLSFVEGSP-- 312
           +P+   + A L +G +D  E  S      +K      Y +   P      ++   G+   
Sbjct: 218 IPDTTVKLANLRAGDLDIAERISASDAESVKNDPKLTYADVIGPGYMAMYVNINNGARAD 277

Query: 313 ---WVDKRVRHAANLCVNREEL-KTLLGGLMEIPKGTVPPGHPWWGNPSFDIKYDLAAAK 368
                DKR+R A +  ++RE + + +  G  +    + PP  PW+         D+  AK
Sbjct: 278 NPLGKDKRLRQAFSYAIDREAIGQIVFEGTSKAGNQSFPPTSPWFNQNLPVPTRDIDKAK 337

Query: 369 KLMTEAGYSAAKPAKVKVLTSASGSGQMQPLPMNEFMQQALKDYFFDVALEVGEWNAVFT 428
           +LM EAGY          L  A+ + Q Q   M + +Q  + +  F+V L+  E+  + +
Sbjct: 338 QLMKEAGYETLDVE----LQHANNTTQTQ---MMQVIQSMVAEAGFNVTLKATEFATLLS 390

Query: 429 NWREGAKHANARGANATNVTFAAMDPFFAMVRFTSTKTFPPVSNNWGYFGNDEFDKLIAD 488
               G    +    +        +DP   + +F + K       N   + N E DKL+ +
Sbjct: 391 EQTAGNYQLSRSDWSGR------IDPDGNLHQFVTCKG----GINDVKYCNPEVDKLLNE 440

Query: 489 ARTSFDGTARDAALAKLHARIVEEAPFVWVAHDVGPRAMSAKVKGVVQPKSWFIDLAPMS 548
           AR S +   R          + ++ P +++ H     A+S KVKG        I L  +S
Sbjct: 441 ARASTEDAVRKEKYDAASVILNDDMPIIYLGHQPYAYAISNKVKGWAPSPDGMIRLLGVS 500

Query: 549 MD 550
            D
Sbjct: 501 KD 502