Pairwise Alignments

Query, 315 a.a., tRNA pseudouridine(55) synthase TruB from Bosea sp. OAE506

Subject, 315 a.a., tRNA pseudouridine 55 synthase from Agrobacterium fabrum C58

 Score =  331 bits (849), Expect = 1e-95
 Identities = 174/304 (57%), Positives = 210/304 (69%), Gaps = 10/304 (3%)

Query: 20  RPKKRDVHGWVVLDKPVGMTSTHAVAVVKRAFAAKKAGHAGTLDPLASGLLPIALGEATK 79
           +PK R + GW++LDKP+   ST AV+ +K  F A+KAGHAGTLDPLASG+LPIALG+ATK
Sbjct: 11  KPKGRPISGWLILDKPLDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGMLPIALGDATK 70

Query: 80  TVPFVMDGRKAYQFTVSWGSQTDTDDTEGKVIATSDARPDEAAIAALLPRFTGTISQVPP 139
           TVP+VMDGRK Y+FTV+WG Q  TDD EG+V+ +SD RP+E AI  +LP +TG I Q PP
Sbjct: 71  TVPYVMDGRKIYEFTVTWGEQRATDDLEGEVVESSDQRPEEQAIRDILPNYTGVIMQTPP 130

Query: 140 KFSAIKIAGERAYDLARDGEEVVLEARPVEIDALRIVA-HDGATTTFEAECGKGTYVRAI 198
           +FSAIKIAGERAYDLARDGE V + AR VEI  L ++A  D  T  FE ECGKGTYVRA+
Sbjct: 131 QFSAIKIAGERAYDLARDGETVEIPAREVEIHRLTLLACPDADTAHFEVECGKGTYVRAL 190

Query: 199 ARDLGLALGCLGHVAHLRRTRVGPFGIADATSVETLR---------KSAESAAGALQPVM 249
           ARD+G  LGC GH++ LRRT V PFG      +ETL          +  E+    L    
Sbjct: 191 ARDMGRDLGCFGHISELRRTMVAPFGEDMMVPLETLTALEAIEDRDERLEALDAFLIDTA 250

Query: 250 AALSLIPEIAINRDAAMRLKRGQSVLLRGRDALPASPAVYATCGGVLIAIGAVEQGEFVP 309
            ALS +P + IN D A RLK G  +LLRGRDA    P  YAT  G L+AIG + +GEF P
Sbjct: 251 EALSSLPRLIINDDQAHRLKMGNPILLRGRDAPANHPEAYATAQGKLVAIGEIGEGEFRP 310

Query: 310 HRVF 313
            RVF
Sbjct: 311 KRVF 314