Pairwise Alignments

Query, 1016 a.a., DNA polymerase I from Bosea sp. OAE506

Subject, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  644 bits (1662), Expect = 0.0
 Identities = 401/1008 (39%), Positives = 559/1008 (55%), Gaps = 95/1008 (9%)

Query: 25   LVDGSNFIFRAYFQSINQDRKYNVRSDG--LPSGAVRLFATKLFQFVREGVLGVRPTHLA 82
            LVDGS++++RA+F     +       DG  L +GA+R+    + +  ++    VR  + A
Sbjct: 2    LVDGSSYLYRAFFAG--GEAMSTTLPDGTVLKTGAIRIMINMMQKLRKD----VRADYAA 55

Query: 83   IVFDKSENSFRKAIYPAYKGNRSDPPPDLIPQFPLMREAVRAFGLLPVEQDVYEADDLIA 142
             VFD    +FR A+YP YK NRS  P DL  Q   + E V+  G   ++    EADD+I 
Sbjct: 56   CVFDAKGPTFRDALYPEYKANRSPMPDDLRAQIAPIHEVVKLLGWKVLDVPGVEADDVIG 115

Query: 143  TYAKQAREAGADVLIVSADKDLMQLVRPGVAMYDPASGDAKKGAGFRAERRIGEPEVVEY 202
            T A  A + G D +I S DKDL QLV   + + D  +   +  AG  AE           
Sbjct: 116  TLAHLAAQQGIDCIISSGDKDLSQLVNEHITVIDTMNDRRRDVAGVTAE----------- 164

Query: 203  FGVMPDKVTDVQALAGDATDNVPGAPGIGIKTAAQLIGEYGDLDTLLARAGEIKQ----- 257
            FGV P  + D Q L GD  DNVPG P +G KTA + + EYG L+ L+ARAGEIK      
Sbjct: 165  FGVPPSLMLDYQTLVGDQVDNVPGVPKVGPKTAVKWLQEYGSLEALVARAGEIKGAAGEN 224

Query: 258  --------PKRRETLTNPEIVEKIRISHKLVSLVDDVVVETPLEDLTLGQPDPVRLVAFL 309
                    PK RE LT       I+I      L D +     LE +T+   D   L AF 
Sbjct: 225  LRNALDWLPKGRELLT-------IKID---CDLQDHIEGLPSLEAITIAGQDSEALKAFG 274

Query: 310  KAMEFTTITKRVGEAYEADVAAIDADADLAPGGTRAAELKALHVGADAAGEAPSVAEMAR 369
            +   F  + K + +             D+ P     +++KA   G   AG+         
Sbjct: 275  ETYGFKGLVKSLTQH------------DVPPERIEESKVKAAAKGK--AGD--------- 311

Query: 370  AAVTQPVSTTGGEGWLKPADLAAARKGEALAAKIDRTGYDCVRDLASLERWVAAAFEAGH 429
                      G  G     DL+ +      A +     YD +      + W+     A  
Sbjct: 312  ----------GSPGLFDEPDLSGS------AERTTNLRYDTLLTWDQFDSWLQRLQAAEL 355

Query: 430  VAIDTETSAIDPMQADLVGISLAVAPGKACYIPLQHRGGTDLFGGGMLEGQIPLDQALAA 489
            VA+DTET+++D M+A++VGIS +V PG+A YIPL+H G            Q+P D+ LA 
Sbjct: 356  VALDTETTSLDEMRAEIVGISFSVTPGEAAYIPLRHAGPE-------APEQLPFDEVLAK 408

Query: 490  LKPLLTDPGVVKIGQNLKYDLVLLKRYGVDVAP-IDDTMLISYALDAGNNSHGMDRLSEL 548
            LKP L DP   K+GQ++KYD  +   +G++V   + DTML SY L+  +  HG+  L+E 
Sbjct: 409  LKPWLEDPAKHKLGQHMKYDRHVFANHGIEVQGYVHDTMLQSYVLEV-HKPHGLASLAER 467

Query: 549  HLGHETITFGQVAGTGKAQVTFDKVALDKATDYAAEDADVTLRLWRTLKPRLAAEGRTTV 608
            HLG + I +  + G G  Q+ F +V + KA +Y+ ED+D TL + R L P+L A+ +   
Sbjct: 468  HLGRQGINYEDLCGKGAHQIPFAQVEVAKAAEYSCEDSDQTLDVHRVLWPQLQADEKLRF 527

Query: 609  YETLERPLIAVLARMEAHGISIDRQILSRLSGDFAQSLARLEDEIYEIAGEKFTIGSPKQ 668
               LE      L R+E +G+ ID   L+  S +  Q +  LE E Y IAG+ F +GSPKQ
Sbjct: 528  IYELEIASSEALYRIERNGVLIDAPTLAAQSHELGQRIVALEQEAYAIAGQPFNLGSPKQ 587

Query: 669  LGDILFGKMGLSGAKKTATGQWATGAGVLEELAEQGHPLPSKILEWRQLSKLKSTYTDSL 728
            LG+I F K+GL   KKTATG  +T   VLE+LAE  +PLP+KILE R L+KLK TYTD L
Sbjct: 588  LGEIFFDKLGLPVIKKTATGARSTDEEVLEKLAED-YPLPAKILEHRSLAKLKGTYTDKL 646

Query: 729  PAYVNPQTQRVHTSFALAATTTGRLSSSEPNLQNIPIRTEAGRKIRTAFVAEKGYKLVSA 788
                 P+T RVHT +A A   TGRLSS++PNLQNIPIRT  GR++R AFVA  G  + SA
Sbjct: 647  AQLALPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGSVIASA 706

Query: 789  DYSQIELRLLAHIAEIPQLRQAFADGIDIHAMTASEMFGVPVQGMPSEVRRRAKAINFGI 848
            DYSQIELR++AHI+    L +AF +G+D+H  TA+E+FGV    + SE RR AK INFG+
Sbjct: 707  DYSQIELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGVETAQVSSEQRRYAKVINFGL 766

Query: 849  IYGISAFGLANQLGIGREEASAYIRKYFERFPGIRDYMEQTKTFVRANGHVETIFGRICH 908
            IYG+ +FGLA  LGI    A  YI +YFERF G++ YM++T+   +  G++ET+FGR   
Sbjct: 767  IYGMGSFGLAKALGIDNTAAKNYITRYFERFEGVKRYMDETRQRAKDMGYIETVFGRRLV 826

Query: 909  FPAVASKNPSERAFVERQAINAPIQGSAADIIRRAMIRMEDALAAARLDVRMLLQVHDEL 968
             P + +   ++ + +ERQAINAP+QG+AAD+I+ +M+ ++ AL   R   +M++QVHDEL
Sbjct: 827  LPDIKNAKGAKLSALERQAINAPMQGTAADLIKLSMVAVQKALDEQRRSTKMIMQVHDEL 886

Query: 969  VFEVPDAQVEAALPVITKVMVEAPHPAVQLRVPLQVDARAAGNWDEAH 1016
            VFEVP+ +V+     I  +M         L+VPL  +     NWD+AH
Sbjct: 887  VFEVPEGEVDWLKTEIPHLMA----GVAALKVPLLAEVGVGPNWDKAH 930