Pairwise Alignments

Query, 529 a.a., ABC transporter substrate-binding protein from Bosea sp. OAE506

Subject, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  278 bits (711), Expect = 4e-79
 Identities = 181/522 (34%), Positives = 262/522 (50%), Gaps = 11/522 (2%)

Query: 6   TRVAALALVLGASVSSAALAQNLTIGVRAGPDSIDPHFTATGTHAESLKHIFDTLTWSGD 65
           T V  L  ++G  V+   +A+NLTIG+     SIDPHF     +      IFD LT    
Sbjct: 4   TGVLLLTSLIGL-VAQPVMAKNLTIGLSGTVTSIDPHFYNASPNNAIAMQIFDRLTERTA 62

Query: 66  KLQIEPRLATSWKAITPDTWEFKLRSGVKFHDGSDFTAEDVKFSIERI-PVVSGPNPTTI 124
           + ++   LAT W  ++   W F LR GVK+HDG  FT++DV F+++R   V + P     
Sbjct: 63  EGRLVEGLATKWDTVSETKWRFALRDGVKWHDGKPFTSDDVIFTLDRAGSVPNSPGGFGG 122

Query: 125 YTRRVKEVKIIDPLTVHIVTDGPAPNLPNDFIRLFIVSSKAAAGLTKDNANETFNSGKAA 184
           + R +  V+      V I T  PAP LP D   + IVS  A  G   D A+  +NSGKAA
Sbjct: 123 FMRNIASVEADGDNAVIISTKAPAPTLPGDLANIAIVSRHAGEGA--DTAD--YNSGKAA 178

Query: 185 IGTGPYKFVSWTPKDQLVLDRFDGYWGPKEPWAKVVRKELPNDAARVAQLKAGQVDIIVR 244
           IGTG ++  ++    ++ L+R   +WG K  W     + + + +AR     AG VD+I  
Sbjct: 179 IGTGAFRLTTFKQGIEVGLERNPDWWGKKVAWDHATYRMISSASARTTAALAGDVDVIDA 238

Query: 245 APASDVATLKRDPKLSVATIDTVYVFNMEIDMREKSPQVSAKD--GSPLPKNPLQDPRVR 302
             A+D+A  K    LS  +   + V  +       + +   K   G  L  NPL DPRVR
Sbjct: 239 PAATDIARFKTTANLSFVSTPGLRVIYLAPSTSGDAWKAFVKGPKGEALDNNPLADPRVR 298

Query: 303 EAIDLAIDRPALVEIAMEGLGAPVNQLVTSSIAGFNKSLPPLKVDLARAKKLLEEAGYPN 362
            A+  AI+R  +V+  MEG      Q +      +   + P K D A AKKLL +AGYP+
Sbjct: 299 NALSEAINREGIVDKIMEGTATASGQWLPKGAFSYTPDIQPPKPDAAGAKKLLADAGYPD 358

Query: 363 GFKTTFSFTNDRLPGDRQVGTSVAQMLARIGLDVTANAQTAAVFFPARTRGEFSLAMSGW 422
           GF+ T    NDR P    V  +VAQM  RIG+     A     F  +  + EF++ + G 
Sbjct: 359 GFQLTVHVPNDRYPNAPAVVQAVAQMWTRIGVKTNVEALPWTTF--SSRKSEFAMKLLGL 416

Query: 423 GTLTGEANYTLSSVVHSNDPAKKLGAFNVLGYKNADLDKLIQDASVELDEAKRNDLLSQA 482
           G  T +A+  L +V+ + DP + LGA N  GY N  LD L+  A +  D+  R   L +A
Sbjct: 417 GNATYDASSMLVNVLGTVDPKRGLGAANDSGYSNPALDDLVSKAMMIYDDKAREAALIEA 476

Query: 483 NAIVAKDRPRLPIVAVGSAWAMQKDKVTIAPRVDEDTLAMDI 524
             +   D   +P+    +AW ++K  +  APR+DE TLA D+
Sbjct: 477 VKVAITDGAIIPLYQQSNAWVLRKG-LNYAPRIDERTLAKDV 517