Pairwise Alignments

Query, 318 a.a., ferric citrate ABC transporter permease from Escherichia coli BL21

Subject, 334 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  172 bits (435), Expect = 1e-47
 Identities = 104/279 (37%), Positives = 156/279 (55%), Gaps = 6/279 (2%)

Query: 46  VLMEYRLPRLLLALFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLLMPS 105
           V+  YRL R L+A   GA LA  GV++Q ++RNPLA P +LG++  AS  +V   L+   
Sbjct: 53  VVWNYRLTRALVAAACGAGLATCGVILQSLLRNPLADPYLLGISAGASTGAVLVALIGVG 112

Query: 106 LPVMVLPLLAFAGGMAGLILLKMLAKTHQPM----KLALTGVALSACWASLTDYLML--S 159
             ++ L   AF G MA   L+ +LA+         ++ L G+A S  + +LT +L+   +
Sbjct: 113 GGLISLSAGAFVGAMAAFALVILLARASGSASGTGQIILAGIAGSQLFNALTAFLITKSA 172

Query: 160 RPQDVNNALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRDLDLLALGDARATTLGV 219
             +     L WL G+L G  W  V +A+P+ +  L + L   R LD    G   A +LG+
Sbjct: 173 SSEQARGILFWLLGNLSGVRWPSVWLAVPVAVAGLAVCLWHRRALDAFTFGSDSAASLGI 232

Query: 220 SVPHTRFWALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTGALL 279
            V   +F  +  A  +T+  V+  G I F+GLV+PH +R + G  H RLLP SAL GAL 
Sbjct: 233 PVRRVQFVLVGCAALVTAVMVSIVGSIGFVGLVIPHAVRLLLGTGHSRLLPASALGGALF 292

Query: 280 LVVADLLARIIHPPLELPVGVLTAIIGAPWFVWLLVRMR 318
           L+ AD+L+R +     +PVGV+TA++GAP F  +L+  R
Sbjct: 293 LIAADVLSRTLIKGQVIPVGVVTALVGAPVFALILIGRR 331