Pairwise Alignments

Query, 331 a.a., putative sugar ABC transporter permease from Escherichia coli BL21

Subject, 335 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  166 bits (420), Expect = 8e-46
 Identities = 106/279 (37%), Positives = 161/279 (57%), Gaps = 4/279 (1%)

Query: 29  FASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVIGDFGLSPL 88
           F S R   NIL     LGI+A+GMT VI+ GGIDLSVGSV+AF+ + L  +  D  +   
Sbjct: 50  FFSLRNGLNILDQVTVLGILAIGMTAVIVIGGIDLSVGSVLAFSMMMLGWLYQDQAVPLG 109

Query: 89  LAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDT 148
            A P+ +  G   G   G LI   K+P FI TL  M   RG++ +++E    + +P  D 
Sbjct: 110 FAIPISIASGMLAGLVSGGLITYAKLPPFIATLTMMSVARGLANILTEGRQIVGYP--DW 167

Query: 149 LSSLAWKIPGGGRLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRS 208
            +SLA     G   + +GL ++ +VV  +FL  R   G  +YA+GG+   A L GI  R+
Sbjct: 168 FTSLATVRHFGFLSATVGLFLVMLVVAWVFLRFRAG-GRNLYAMGGSPEVARLSGIKVRA 226

Query: 209 TTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGT 268
            T+ +Y +S  LA +A +  +    +    AG+ +ELDAIA+VVIGG  LSGGVG++ GT
Sbjct: 227 ITLWVYAISGALAGIAAVTLAARLDSSQPSAGLSLELDAIAAVVIGGASLSGGVGSIGGT 286

Query: 269 LFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIAL 307
           L GV I G+++  +N  G +S +  ++ IG+++ + + +
Sbjct: 287 LVGVLIIGVLRNGLNLLG-VSPFIQQVVIGVVIALAVTI 324