Pairwise Alignments

Query, 334 a.a., HflB protease modulator specific for phage lambda cII repressor from Escherichia coli BL21

Subject, 328 a.a., protease from Pseudomonas simiae WCS417

 Score = 87.0 bits (214), Expect = 6e-22
 Identities = 69/302 (22%), Positives = 138/302 (45%), Gaps = 41/302 (13%)

Query: 2   RKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPF-IE 60
           R+   A+++++  V   S+  V+ GE  +  RFG   R      ++ EPGL ++ P   E
Sbjct: 31  RRMTWALLLVLFAVAAASLVQVRSGEATVITRFGNPSR------VLLEPGLGWRWPAPFE 84

Query: 61  TVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLK 120
               +D R++T  +      T++   +IV +Y+ W++            GD    +  ++
Sbjct: 85  AAIPVDLRLRTTSSGLQDVGTRDGLRIIVQAYVAWQVQ-----------GDADNVQRFMR 133

Query: 121 RKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTE--DEVTTPAADNAIAEA 178
                          V++   ++  ++   V  AL + +A  +    + T A+   IA+ 
Sbjct: 134 A--------------VQNQPDEAARQIRTFVGSALETTAASFDLSSLINTDASQVRIADF 179

Query: 179 AERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRH 238
             ++  +       I+   +   G+ V  V I+++ LP+    A  +RMRAERE +A   
Sbjct: 180 EAQLRQQ-------IDQQLLTTYGVRVAQVGIERLTLPSVTLTATVDRMRAERETIATER 232

Query: 239 RSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIR 298
            + G+ EA ++R+ A+ +     A+A  +   +  +   EAA+++A A++ +P  Y  +R
Sbjct: 233 TAVGKREAAQIRSAAERDARIVQADATVKAADIEAQSRVEAAQIYARAYAGNPQLYNLLR 292

Query: 299 SL 300
           SL
Sbjct: 293 SL 294