Pairwise Alignments

Query, 512 a.a., cadBA operon transcriptional activator from Escherichia coli BL21

Subject, 514 a.a., Transcriptional activator of cad operon from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  593 bits (1528), Expect = e-174
 Identities = 302/517 (58%), Positives = 365/517 (70%), Gaps = 8/517 (1%)

Query: 1   MQQPVVRVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSRDELIDNVWKR 60
           MQQPVVR+GEWLVTPS+NQISR GRQ+TLEPRLIDLL++FA H  EVLSRD +ID+VW R
Sbjct: 1   MQQPVVRIGEWLVTPSVNQISRQGRQITLEPRLIDLLMYFAHHPDEVLSRDNIIDHVWMR 60

Query: 61  SIVTNHVVTQSISELRKSLKDNDEDSPVYIATVPKRGYKLMVPVIWYSEEEGEEIMLSSP 120
           +IVTNHVVTQSISELRKSL+D  + +  YI TVPKRGYKL  PVIW  EE  +EI  SS 
Sbjct: 61  TIVTNHVVTQSISELRKSLRDGGDSNAEYIVTVPKRGYKLTAPVIW-CEENSDEIDNSST 119

Query: 121 PPIPEAVPATDSPSHSLNIQNTATPPE-QSPVKSK---RFTTFWVWFFFLLSLGICVALV 176
            P P        P+  +       P   Q+P K     R   FW W  FLLSL   V  +
Sbjct: 120 SPPPPIAATNAEPTEGVTAATPVPPASLQTPTKKAKKPRIAAFWTWVMFLLSLATLVVFI 179

Query: 177 AFSSLDTRLPMSKSRILLNPRDIDINMVN-KSCNSWSSPYQLSYAIGVGDLVATSLNTFS 235
             S +D    ++K+R+LLNPRDID+      SCN+W S  Q SYAIG+G L+   LNT+S
Sbjct: 180 VMSVVDHNAAVTKTRLLLNPRDIDVRFEGGNSCNNWVS--QESYAIGLGGLITDLLNTYS 237

Query: 236 TFMVHDKINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSIKLVDNADGSTMLDKRYVIT 295
           TFMVHDK NY ++EPSSSGKTL+I FVNQR YRAQQCFMS+ L+DNADGSTMLDKRY +T
Sbjct: 238 TFMVHDKTNYRVNEPSSSGKTLTIQFVNQRHYRAQQCFMSVVLIDNADGSTMLDKRYFVT 297

Query: 296 NGNQLAIQNDLLESLSKALNQPWPQRMQETLQQILPHRGALLTNFYQAHDYLLHGDDKSL 355
           N NQL+IQ+DL  SLS  L QPWP RM+E L      +   L  FY+A   +L GD ++L
Sbjct: 298 NTNQLSIQDDLFNSLSFVLTQPWPNRMREQLALFRTPQNTALMRFYEARQLILSGDAQAL 357

Query: 356 NRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 415
            +AS++L  I++ +P+F YA   K LVD++R SQ P D++Q+AALN E   I  +P +  
Sbjct: 358 GKASDILNGIIKETPDFNYAYEYKVLVDVLRQSQQPFDKEQVAALNEEFKKIDQIPGVEK 417

Query: 416 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLT 475
            S+ Y+IK V  L KG  D +Y+ IN  I+LEMSW NYVLLGKVYEMKG NR AADAYLT
Sbjct: 418 TSVYYKIKTVDLLGKGDIDAAYEEINKSIELEMSWFNYVLLGKVYEMKGENRLAADAYLT 477

Query: 476 AFNLRPGANTLYWIENGIFQTSVPYVVPYLDKFLASE 512
           AFNLRPG NTLYWIENG+FQTSV  +VPYL+ FLA +
Sbjct: 478 AFNLRPGENTLYWIENGVFQTSVQKIVPYLNSFLAED 514