Pairwise Alignments

Query, 940 a.a., ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC from Escherichia coli BL21

Subject, 941 a.a., excinuclease ABC subunit UvrA from Erwinia tracheiphila SCR3

 Score = 1715 bits (4441), Expect = 0.0
 Identities = 852/940 (90%), Positives = 900/940 (95%)

Query: 1   MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIEVRGARTHNLKNINL+IPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120
           ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120

Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180
           P+HDV LAAQTVSQMVDNVL+  EG+RLMLLAPIIKERKGEH+KTLENLASQGYIRARID
Sbjct: 121 PEHDVTLAAQTVSQMVDNVLALTEGRRLMLLAPIIKERKGEHSKTLENLASQGYIRARID 180

Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240
           GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDL QRLAESFETALELSGGT VVADMDD 
Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLQQRLAESFETALELSGGTVVVADMDDT 240

Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300
            AEEL+FSANFACP+CGYSM ELEPRLFSFNNPAGAC TCDGLGVQQYFDP+RV+QNP+L
Sbjct: 241 SAEELVFSANFACPVCGYSMSELEPRLFSFNNPAGACATCDGLGVQQYFDPERVVQNPDL 300

Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360
           SLAGGAIRGWDRRNFYYFQML SL++H  FD+E P+ SL A+  KV+LYGSGKENIEFKY
Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLCSLSEHLNFDIETPFISLDASTRKVILYGSGKENIEFKY 360

Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420
           +NDRGDTS+RRHPFEGVLHNMERRYKETES+AVRE+LAKFISNR CASCEGTRLRREARH
Sbjct: 361 INDRGDTSVRRHPFEGVLHNMERRYKETESAAVREDLAKFISNRACASCEGTRLRREARH 420

Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480
           V+VENT LP ISDMSIGHAM FF  +KL+GQRAKIAEK+LKEIGDRLKFLVNVGLNYL+L
Sbjct: 421 VFVENTNLPTISDMSIGHAMTFFQEMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL 480

Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540
           SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TL+HLR+LGNT
Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLVHLRNLGNT 540

Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600
           VIVVEHDEDAIRAADHVIDIGPGAGV GG+VVAEG ++ IMAV  SLTGQ++SGKR I V
Sbjct: 541 VIVVEHDEDAIRAADHVIDIGPGAGVRGGQVVAEGTVDDIMAVDASLTGQFLSGKRSIAV 600

Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660
           P++RV A P KVLKLTGA+GNNLKDVTLTLPVGLF+CITGVSGSGKSTLINDTLFPIAQR
Sbjct: 601 PQERVKAAPNKVLKLTGAKGNNLKDVTLTLPVGLFSCITGVSGSGKSTLINDTLFPIAQR 660

Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTSVRELFAGVPE 720
            LNGATI EPAPYRDI G+EHFDKVIDIDQSPIGRTPRSNPATYTG+FT VRELF+GVPE
Sbjct: 661 LLNGATIIEPAPYRDISGMEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFSGVPE 720

Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780
           SR RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
Sbjct: 721 SRTRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780

Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840
           KGK+IHEVL+MTIEEAREFFDAVPALARKLQT+MDVGL+YIRLGQSATTLSGGEAQRVKL
Sbjct: 781 KGKSIHEVLEMTIEEAREFFDAVPALARKLQTMMDVGLSYIRLGQSATTLSGGEAQRVKL 840

Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900
           ARELSKRGTGQTLYILDEPTTGLHFADIQQLL+VLH+LRDQGNTIVVIEHNLDVIKTADW
Sbjct: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW 900

Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940
           IVDLGPEGGSGGGEIL SGTPETVA+C+ASHTARFLKP+L
Sbjct: 901 IVDLGPEGGSGGGEILASGTPETVAKCKASHTARFLKPLL 940