Pairwise Alignments

Query, 421 a.a., ATP-dependent RNA helicase from Escherichia coli BL21

Subject, 563 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  268 bits (684), Expect = 4e-76
 Identities = 163/410 (39%), Positives = 232/410 (56%), Gaps = 16/410 (3%)

Query: 11  FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70
           F D  L P++++AL + G+ + TPIQA A+P+ L GRDV G AQTGTGKT +F       
Sbjct: 20  FEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMIEI 79

Query: 71  LLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKV 130
           L +  A    K   PR+LI+APTRELA Q+  + +   +   LK  L  GG+    Q+ +
Sbjct: 80  LAAGRA----KARMPRSLILAPTRELAAQVAENFDKYGKYHPLKKALIIGGESMSDQVAL 135

Query: 131 LESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN 190
           L+ GVD+LI T GRL+D  ++  I L  ++V+V+DEADRM D+GFI D+  +   +P   
Sbjct: 136 LDRGVDVLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIR 195

Query: 191 QRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL 250
           Q L   FSAT+   +R LA   + N + ++V         + + L      +K   L+ L
Sbjct: 196 QTL--FFSATMGPEIRRLADAFLMNPKEVKVSTGASAATTVVQALAVVEEIDKRETLRHL 253

Query: 251 IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDIL 310
           I  E    A IF N K   + ++  L   G  V  L GD+AQ  R   L++F +G+  ++
Sbjct: 254 IRIEEVKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGETLEKFKKGEARLM 313

Query: 311 VATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPA 370
           V +DVAARG+ I AV+HVFN+D+P   EDYVHRIGRTGRAG  GH+ ++A  +    + A
Sbjct: 314 VCSDVAARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGA 373

Query: 371 IETYIGHSIP-VSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRR 419
           IE  IG +IP +S     AL  D+         R G G R  GAP++ +R
Sbjct: 374 IEAMIGTTIPRISVEGVPALDLDM-------TARKGRGGR--GAPKDAKR 414