Pairwise Alignments

Query, 321 a.a., D-ribose ABC transporter permease from Escherichia coli BL21

Subject, 330 a.a., sugar ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  275 bits (703), Expect = 1e-78
 Identities = 140/297 (47%), Positives = 202/297 (68%), Gaps = 4/297 (1%)

Query: 24  IALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALT 83
           + L+V+  ++   S  F T +NL NI +Q S+NAI+AVGMT VILT GIDLSVG ++AL+
Sbjct: 36  VGLVVVTVVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMALS 95

Query: 84  GAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMV 143
           G + A ++   +   +A+ A + +G A G   G+ VA   +   I TL  M + RG+ ++
Sbjct: 96  GTLTAGLMVAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPIIVTLATMGIARGLGLM 155

Query: 144 YTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALG 203
           YT+G P++       D F +FG     G+  P+ IM + +LAA+ +L HTR+GRYIYA+G
Sbjct: 156 YTDGYPISG----LPDWFAFFGRESLFGIQVPILIMLLTYLAAYVLLQHTRIGRYIYAIG 211

Query: 204 GNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVL 263
           GNE A RLSG+   + K++VY + GL A++AG++  +RL S QP AG  +ELDAIAAVVL
Sbjct: 212 GNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFELDAIAAVVL 271

Query: 264 GGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKK 320
           GG S+AGG+G IVGTL+GA++LG LNNGLN+LGVS Y Q ++K  +ILLA+ +  ++
Sbjct: 272 GGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAIFISRQR 328