Pairwise Alignments

Query, 321 a.a., D-ribose ABC transporter permease from Escherichia coli BL21

Subject, 331 a.a., Predicted ABC-type sugar transport system, permease component from Enterobacter asburiae PDN3

 Score =  247 bits (630), Expect = 3e-70
 Identities = 136/303 (44%), Positives = 190/303 (62%), Gaps = 7/303 (2%)

Query: 17  LMEQKSLIALLVLI-AIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLS 75
           LM+   ++ +L+LI A+   ++PNFFT +NL NI +Q S+N ++A GMT +ILT GIDLS
Sbjct: 24  LMQTVGILPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFIILTGGIDLS 83

Query: 76  VGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMML 135
           VGS+L  T   A  +  I   A++++ AAL LG  +G   G +VA   +  FI TL    
Sbjct: 84  VGSILGTTAVAAMVVSLIPEFAMLSIPAALMLGMVLGLFNGALVAFAGLPPFIVTLGTYT 143

Query: 136 LLRGVTMVYTNGSPV-NTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTR 194
            LRG   +  +G+ V N+  +     F W G      +P  V I   V    W++L  T 
Sbjct: 144 ALRGAAYLLADGTTVINSNIS-----FEWIGNNYLGPIPWLVVIALAVIAICWFILRRTT 198

Query: 195 LGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYE 254
           LG +IYA+GGN  A RL+GI V  + + VY + GLL+ L G++  +RL SA    GTGYE
Sbjct: 199 LGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLYSANGNLGTGYE 258

Query: 255 LDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAV 314
           LDAIAAV+LGGTS  GG G I GTL+GALI+  LNNG+ L+GVS ++Q+++K  VI++AV
Sbjct: 259 LDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLVIKGAVIIIAV 318

Query: 315 LVD 317
           L+D
Sbjct: 319 LID 321