Pairwise Alignments

Query, 321 a.a., D-ribose ABC transporter permease from Escherichia coli BL21

Subject, 342 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  258 bits (660), Expect = 1e-73
 Identities = 142/307 (46%), Positives = 200/307 (65%), Gaps = 16/307 (5%)

Query: 23  LIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLAL 82
           LI +++L+    + + NFF+  N+FNIL + S+  IMAVGMT VILT+GIDLSVGS+LA+
Sbjct: 30  LIFMILLLIFFQSQNSNFFSERNIFNILTEVSIYGIMAVGMTFVILTAGIDLSVGSILAV 89

Query: 83  TGAVAASIVG------IEVNA------LVAVAAALALGAAIGAVTGVIVAKGRVQAFIAT 130
               AA ++       ++ NA      L+ +   LA+G AIG + G+ V + R+  FI T
Sbjct: 90  CAMTAAYVIKGDNFTTVDPNAWGGMSWLIGLGICLAMGTAIGFLHGLGVTRLRLPPFIVT 149

Query: 131 LVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYML 190
           L  M + RG+T+V  +G+P+  GF      + W+G G  LG+  P+WI  IV +  +  L
Sbjct: 150 LGGMTIWRGLTLVINDGAPI-AGFDPG---YRWWGRGELLGISIPIWIFAIVAVGGYLAL 205

Query: 191 HHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAG 250
           H TR GR++YA+GGN  A RL+G+NV ++ + VY L G LA LAG I  ARL SA+  AG
Sbjct: 206 HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLGSAEAVAG 265

Query: 251 TGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVI 310
             +EL  IA+VV+GGTSL GG GRI GT+IG++I+G L NGL L+ VS+YYQ I+  ++I
Sbjct: 266 ISFELRVIASVVIGGTSLMGGYGRIGGTIIGSIIMGILINGLVLMNVSAYYQQIITGLII 325

Query: 311 LLAVLVD 317
           +LAV  D
Sbjct: 326 VLAVAFD 332