Pairwise Alignments

Query, 321 a.a., D-ribose ABC transporter permease from Escherichia coli BL21

Subject, 344 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  253 bits (645), Expect = 6e-72
 Identities = 140/306 (45%), Positives = 195/306 (63%), Gaps = 16/306 (5%)

Query: 24  IALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALT 83
           I +++L+      + NF T  N+ NIL + S+  IMAVGM+ VILT+GIDLSVGS+LA+ 
Sbjct: 33  IFMILLLIFFQLQNSNFLTERNITNILTEVSIYGIMAVGMSFVILTAGIDLSVGSILAVC 92

Query: 84  GAVAASIVG------IEVNA------LVAVAAALALGAAIGAVTGVIVAKGRVQAFIATL 131
              AA ++       ++  A      LV +   LA+G AIG + G+ V + R+  FI TL
Sbjct: 93  AMTAAYVIKGDNFTTVDAQAWGGMSWLVGLGICLAMGTAIGFLHGLGVTRLRLSPFIVTL 152

Query: 132 VMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYMLH 191
             M + RG+T+V  +G+P+  GF      + W+G G  LGV  P+WI  +V L  W  LH
Sbjct: 153 GGMTIWRGLTLVVNDGAPI-AGFDPG---YRWWGRGELLGVSIPIWIFALVALIGWLALH 208

Query: 192 HTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGT 251
            TR GR++YA+GGN  A RL+G+NV ++ + VY + G LA LAG I  ARL SA+  AG 
Sbjct: 209 KTRWGRFVYAIGGNTEAARLAGVNVQRVLVSVYVVIGALAGLAGFILSARLGSAEAVAGI 268

Query: 252 GYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVIL 311
            +EL  IA+VV+GGTSL GG GRI GT+IG++I+G L NGL L+ VS+YYQ I+  ++I+
Sbjct: 269 SFELRVIASVVIGGTSLMGGYGRISGTIIGSVIMGILINGLVLMNVSAYYQQIITGLIIV 328

Query: 312 LAVLVD 317
           LAV  D
Sbjct: 329 LAVAFD 334