Pairwise Alignments

Query, 321 a.a., D-ribose ABC transporter permease from Escherichia coli BL21

Subject, 355 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  249 bits (637), Expect = 5e-71
 Identities = 134/333 (40%), Positives = 207/333 (62%), Gaps = 27/333 (8%)

Query: 9   RRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVIL 68
           ++Y    +L++ ++ IALL+++A  S + PNF T +NL  + Q  ++  ++A+GMTLVIL
Sbjct: 3   QKYTLYMYLLKARTFIALLLVVAFFSLMVPNFLTASNLLIMTQHVAITGLLAIGMTLVIL 62

Query: 69  TSGIDLSVGSLLALTGAVAASIV--GIEV--------NALVAVAAALALGAAIGAVTGVI 118
           T GIDLSVG++  + G VA +++  GI +        N    +     LG  IG V GV+
Sbjct: 63  TGGIDLSVGAVAGICGMVAGALLTNGIPLWGGNTLFLNVPEVILVVSVLGMLIGLVNGVV 122

Query: 119 VAKGRVQAFIATLVMMLLLRGVTMVYT--------NGSPV--NTGFTENADLFGWFGIGR 168
           + +  V  FI TL MM + RGV +++         NG P   NTGF        + G G 
Sbjct: 123 ITRLVVAPFICTLGMMYVARGVALLFNDGGTYANLNGMPALGNTGFA-------FLGSGT 175

Query: 169 PLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCG 228
            LG+  P+W+M    L   Y+   T LGRYIYA+GGNE+A RL+G+ +  +KI VY+  G
Sbjct: 176 LLGIYLPIWLMLAFLLLGLYLTRKTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSG 235

Query: 229 LLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFL 288
           L A+L G++  ++L +A P  G  +E+DAI A VLGGT+LAGG+GR+ G++IGA ++ FL
Sbjct: 236 LCAALVGLVVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFL 295

Query: 289 NNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ 321
            +G+ ++GVS ++QM++K +VI+ AV++D  +Q
Sbjct: 296 ADGMVMMGVSDFWQMVIKGLVIVTAVVIDQFQQ 328