Pairwise Alignments

Query, 501 a.a., D-ribose ABC transporter ATPase from Escherichia coli BL21

Subject, 517 a.a., Inositol transport system ATP-binding protein (from data) from Pseudomonas simiae WCS417

 Score =  473 bits (1216), Expect = e-138
 Identities = 244/491 (49%), Positives = 336/491 (68%), Gaps = 2/491 (0%)

Query: 4   LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYARDAGTLLW 63
           LL++  I K FPGV AL+   L V PG V+AL+GENGAGKST+MK++ GIY  DAG +  
Sbjct: 23  LLEIVNISKGFPGVVALADVQLRVRPGTVLALMGENGAGKSTLMKIIAGIYQPDAGEIRL 82

Query: 64  LGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEAD 123
            GK   F  P ++Q+AGI +IHQELNL+P ++IAENI++GRE +N    ++ + M+    
Sbjct: 83  RGKPIVFETPLAAQKAGIAMIHQELNLMPHMSIAENIWIGREQLNSLHMVNHREMHRCTA 142

Query: 124 KLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRV 183
           +LLA+L +    ++ VG+LSI ++QMVEIAK +S++S ++IMDEPT A+T+ E   LF +
Sbjct: 143 ELLARLRINLDPEEQVGNLSIAERQMVEIAKAVSYDSDILIMDEPTSAITEKEVAHLFSI 202

Query: 184 IRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRKLE 243
           I +LKSQG+GIVYI+H+M E+F I D+V VFRDG +I  +   S+  DSLI MMVGR+L 
Sbjct: 203 IADLKSQGKGIVYITHKMNEVFAIADEVAVFRDGHYIGLQRADSMNSDSLISMMVGRELS 262

Query: 244 DQYPHLDKAPGDIRLKVDNLCGPGV-NDVSFTLRKGEILGVSGLMGAGRTELMKVLYGAL 302
             +P  +   GD+ L V +L   GV  DVSF L  GEILG++GLMG+GRT + + ++G  
Sbjct: 263 QLFPLRETPIGDLLLTVRDLTLDGVFKDVSFDLHAGEILGIAGLMGSGRTNVAETIFGIT 322

Query: 303 PRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRA 362
           P +SG +TLDG  V    P   +  G   ++EDRK  GL   +SV ENM +  L +++  
Sbjct: 323 PSSSGQITLDGKAVRISDPHMAIEKGFALLTEDRKLSGLFPCLSVLENMEMAVLPHYT-G 381

Query: 363 GGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEP 422
            G ++    +    D  +   VKTPS+EQ I  LSGGNQQK  +AR LMT P++LILDEP
Sbjct: 382 NGFIQQKALRALCEDMCKKLRVKTPSLEQCIDTLSGGNQQKALLARWLMTNPRLLILDEP 441

Query: 423 TRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQA 482
           TRG+DVGAK EIY+LI    ++G+++I++SSE+PEVLGMSDR++VMHEG L G   R +A
Sbjct: 442 TRGIDVGAKAEIYRLIAFLASEGMAVIMISSELPEVLGMSDRVMVMHEGELMGTLDRSEA 501

Query: 483 TQEVLMAAAVG 493
           TQE +M  A G
Sbjct: 502 TQEKVMQLASG 512



 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 9/232 (3%)

Query: 266 PGV---NDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQ 322
           PGV    DV   +R G +L + G  GAG++ LMK++ G     +G + L G  +V  +P 
Sbjct: 34  PGVVALADVQLRVRPGTVLALMGENGAGKSTLMKIIAGIYQPDAGEIRLRGKPIVFETPL 93

Query: 323 DGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLF 382
                GI  I ++     L+  MS+ EN+ +   +  S     + H +  +  ++ +   
Sbjct: 94  AAQKAGIAMIHQELN---LMPHMSIAENIWIGREQLNSLH--MVNHREMHRCTAELLARL 148

Query: 383 NVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFK 442
            +     EQ +G LS   +Q V IA+ +     +LI+DEPT  +       ++ +I   K
Sbjct: 149 RINLDPEEQ-VGNLSIAERQMVEIAKAVSYDSDILIMDEPTSAITEKEVAHLFSIIADLK 207

Query: 443 ADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGK 494
           + G  I+ ++ +M EV  ++D + V  +GH  G    +    + L++  VG+
Sbjct: 208 SQGKGIVYITHKMNEVFAIADEVAVFRDGHYIGLQRADSMNSDSLISMMVGR 259