Pairwise Alignments

Query, 330 a.a., D-xylose transporter subunit from Escherichia coli BL21

Subject, 340 a.a., D-xylose ABC transporter, substrate-binding protein XylF from Variovorax sp. SCN45

 Score =  247 bits (631), Expect = 3e-70
 Identities = 138/332 (41%), Positives = 206/332 (62%), Gaps = 8/332 (2%)

Query: 1   MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60
           M++K+ L  +   L  T V A A+ V +G++  + + ERW+ D      + E LGAK   
Sbjct: 1   MQLKHTLAAMAFGL--TAVGAMAQTV-VGVSWSNFQEERWKTDEAAIKAELEKLGAKYIS 57

Query: 61  QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120
             A G+ E Q+  IE ++++G   L+++  +   +   V +A ++ + V+AYDR+I    
Sbjct: 58  ADAGGSPEKQLGDIEGLMSKGAKALIVLAMDKDAILPAVTKATRQKVPVVAYDRLIEAPG 117

Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180
           + FYI+FDN +VG ++A+ ++ + P+GNY ++ GSP D NA   RAGQ +VL   +  G 
Sbjct: 118 V-FYITFDNVEVGRMEAREVLKVKPKGNYVIIKGSPSDPNADFLRAGQQEVLDASIKKGD 176

Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240
           IK+VGD++ +GW PE A K ME  LT N NK+DAVVA+ND TAGGA+ AL+A+GL G + 
Sbjct: 177 IKIVGDEYTEGWKPEVAQKNMEQILTKNGNKVDAVVAANDGTAGGAVAALTAKGLRG-IP 235

Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTSLNNGLKDV 300
           +SGQDAD A + RIA GTQT T++K    L   AA  A+ L  G+      + N+G K V
Sbjct: 236 VSGQDADFAALNRIALGTQTATIFKDSRELGREAAIAAIALSQGKPVDKAATWNSGPKKV 295

Query: 301 --PSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330
              SRLLTP+ V ++N+ D V+K G+ K+ EL
Sbjct: 296 SLQSRLLTPVPVTRDNL-DVVVKAGWIKKDEL 326