Pairwise Alignments

Query, 330 a.a., D-xylose transporter subunit from Escherichia coli BL21

Subject, 310 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  115 bits (288), Expect = 1e-30
 Identities = 99/322 (30%), Positives = 153/322 (47%), Gaps = 40/322 (12%)

Query: 8   LTLCTSLLLTNVAAH----AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63
           L L T+L    + A     AK++ IG+A+ +L+ + + + +     + ++ G KV    A
Sbjct: 7   LLLATALAAATLTAAGTTWAKDLTIGLAVANLQADFFNQIKQSVEAEGKAKGIKVITVDA 66

Query: 64  NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123
            GN  TQ+SQIE++I R +DVL+ IP         VK AK  GI V+A DR   DA  D 
Sbjct: 67  QGNSSTQVSQIEDLITRQIDVLIYIPAGATAAGVPVKAAKAAGIPVIAVDRNAPDAPGDT 126

Query: 124 YISFDN--------EKVGEL-QAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174
           +I+ D+        E VG+L   K  + I+ QG    +G +P ++ AK F  G    LK 
Sbjct: 127 FIASDSVAGAKTLAEYVGKLTDGKGRIAIL-QGQ---LGTTPENDRAKGFEEG----LKA 178

Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234
           + D   +K+V  Q  + W  +    + ++ L  + N I       DA A GA QA+    
Sbjct: 179 FPD---LKIVAQQPAE-WAQDKGFAVAQDLLQRDPN-ITVFFGRADAMALGAAQAVKVGN 233

Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTSLN 294
           L  KV + G D D+AG+K + +G    T+ +    +   A   A++L  G          
Sbjct: 234 LDHKVVVVGFDGDVAGLKAVQSGVLNATMTQQTQKMGRLAVASAIDLKAG---------- 283

Query: 295 NGLKDVP-SRLLTPIDVNKNNI 315
              KDVP  +LL  +   K N+
Sbjct: 284 ---KDVPREQLLPTVLTTKENV 302