Pairwise Alignments

Query, 330 a.a., D-xylose transporter subunit from Escherichia coli BL21

Subject, 311 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 85/322 (26%), Positives = 154/322 (47%), Gaps = 27/322 (8%)

Query: 1   MKIKNILLTLCTSLLLTNVAAHAKEVKIGM---AIDDLRLERWQKDRDIFVKKAESL--- 54
           MK       L  S+LL +  A A ++KIG+   A DD  L   ++D D   K+A+S    
Sbjct: 1   MKTPIRFTALALSMLLASGFASAADLKIGVSMSAFDDTFLTYLREDMD---KQAKSYPKG 57

Query: 55  -GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113
            G ++  + A  +   Q+SQ+EN I++ VD +++ P +     N++  A + GI ++  +
Sbjct: 58  DGVQLQFEDARADVVKQLSQVENFISQKVDAIIVNPVDTASTKNIINAATKAGIPLVFVN 117

Query: 114 RMINDADID---FYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQM 169
           R  +  D+      ++ D+ + G LQ + + + +  +G   ++ G   +N+      G  
Sbjct: 118 RRPDQKDLPKDVVAVTSDDIEAGRLQMQYIAEKLGGKGKIVILLGDLANNSTTNRTKGVK 177

Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229
           +VL  Y D   IK+  +Q    WL +  + ++ + LT    + +AV+A+ND  A GA  A
Sbjct: 178 EVLAKYPD---IKIEQEQ-TGIWLRDKGMTLVNDWLT-QGREFNAVLANNDEMAIGASMA 232

Query: 230 LSAQGLS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288
           L + G   G V I+G D    G+  I  G    + ++     A  + E A ++   +EP 
Sbjct: 233 LKSAGTKPGSVLIAGVDGTPDGLNAITKGDMAASAFQDAKGQAVGSVEAARKMAK-KEPV 291

Query: 289 ADTSLNNGLKDVPSRLLTPIDV 310
               +      +P +L+TP +V
Sbjct: 292 EQNVI------IPFQLITPENV 307