Pairwise Alignments

Query, 330 a.a., D-xylose transporter subunit from Escherichia coli BL21

Subject, 346 a.a., xylose ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  244 bits (622), Expect = 3e-69
 Identities = 140/326 (42%), Positives = 200/326 (61%), Gaps = 7/326 (2%)

Query: 7   LLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN 66
           LL     L+  + AA A ++ +G++  + + ERW+ D        +  GAK     A  +
Sbjct: 7   LLAGTAVLVSLHTAAIAADLVVGVSWSNFQEERWKTDEAAIKAALDKAGAKYISADAQSS 66

Query: 67  EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYIS 126
              Q++ +E++I++G + L+I+  +   +   V++A  EGI V+ YDR+I + +  FYI+
Sbjct: 67  AAKQLTDVESLISQGANALIILAQDSDAIGPAVEKAVAEGIPVVGYDRLIENKNA-FYIT 125

Query: 127 FDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGD 186
           FDN++VG LQA  +  + P+GNY  + GS  D NA    AGQ +VLK  + SGKIK VG+
Sbjct: 126 FDNKEVGRLQAAEVFKVKPEGNYVFIKGSSSDPNADFLFAGQQEVLKAAMSSGKIKNVGE 185

Query: 187 QWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDA 246
            + DGW PENA K ME  LT NNNK+DAVVASND TAGGAI AL+AQG++G V +SGQDA
Sbjct: 186 AYTDGWKPENAQKNMEQFLTKNNNKVDAVVASNDGTAGGAIAALAAQGMAGSVPVSGQDA 245

Query: 247 DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ---EPKADTSLNNGLKDV--P 301
           D A + R+A GTQT++V+K    L   AA IA+ L  G+   E K  T+ + G K V   
Sbjct: 246 DFAALNRVALGTQTVSVWKDSRELGKEAAGIALALAGGKKMTEIKGVTAFDGGPKKVTMQ 305

Query: 302 SRLLTPIDVNKNNIKDTVIKDGFHKE 327
           S  L PI + K+N+  TVI  G+ K+
Sbjct: 306 SVFLKPIAITKDNL-GTVIDAGWIKK 330