Pairwise Alignments

Query, 330 a.a., D-xylose transporter subunit from Escherichia coli BL21

Subject, 309 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

 Score =  113 bits (282), Expect = 7e-30
 Identities = 84/295 (28%), Positives = 147/295 (49%), Gaps = 14/295 (4%)

Query: 1   MKIKNILLTLCTSLLLTNVAAHAKEVK-IGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59
           MK   ILLT    L L+  +A+A EVK IG+A+ +L+   + + +     +A++ G  V 
Sbjct: 1   MKFSRILLTSAALLALSLGSANAAEVKKIGLAVANLQANFFNQIKQAVEAEAKTRGIAVV 60

Query: 60  VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119
              A G+  TQ++QI++++ + +D L+ IP      +  VK AK  G+ V+  DR  + A
Sbjct: 61  TVDAKGDGPTQVNQIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDRNADGA 120

Query: 120 DIDFYISFDNEKVGELQAKALVDIVPQ-----GNYFLMGGSPVDNNAKLFRAGQMKVLKP 174
             D +++ D+       AK++ D + +     G   ++ G            G M+ +K 
Sbjct: 121 PGDTFLATDS----VASAKSVCDYIIKQAGGAGKMVIIHGQKGTTPEVDRTKGCMESVK- 175

Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234
             +SG +K+V +QW + W  +   +IM+N L AN + +  V A  D  A GA QA+    
Sbjct: 176 -ANSG-VKIVAEQWSNMWSQDEGFQIMQNMLQANPD-VSIVFAQADGLALGAAQAIKVAN 232

Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289
            S K+ + G D D A ++ +  G   +T  +    +   A E+AV++  G++  A
Sbjct: 233 PSQKIVVGGFDGDTAALEALKNGVFDVTATQQTQKMGRMAVEMAVKIVGGEKVPA 287