Pairwise Alignments

Query, 1034 a.a., multidrug efflux system protein from Escherichia coli BL21

Subject, 1049 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

 Score = 1598 bits (4138), Expect = 0.0
 Identities = 803/1033 (77%), Positives = 917/1033 (88%), Gaps = 1/1033 (0%)

Query: 1    MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDT 60
            M NFFI RPIFAWV+AII+M+AG LAIL+LPVAQYPTIAPPAV++SA+YPGADA+TVQDT
Sbjct: 1    MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT 60

Query: 61   VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ 120
            VTQVIEQNMNGIDNLMYMSS SDS G+V ITLTF+SGTD DIAQVQVQNKLQLA PLLPQ
Sbjct: 61   VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ 120

Query: 121  EVQQQGISVEKSSSSYLMVAGFVSDNPDITQDDISDYVASNVKDTLSRLNGVGDVQLFGA 180
            EVQQQG+SVEKSSSS+LMV G ++ +  +TQ+DISDYVA+N+KD +SR +GVGDVQLFG+
Sbjct: 121  EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS 180

Query: 181  QYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL 240
            QYAMRIW++ + LNK++LTPVDVI  +K QN Q+AAGQLGGTP + GQQLNASIIAQTRL
Sbjct: 181  QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240

Query: 241  KNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANAL 300
             + EEFGK+ L+VN DGS V L+DVA++ELGGENY++IA  NG+PA+GLGIKLATGANAL
Sbjct: 241  TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL 300

Query: 301  DTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQ 360
            DTA AI+A+LA+++PFFP G+K++YPYDTTPFV++SIHEVVKTL EAI+LVFLVMYLFLQ
Sbjct: 301  DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ 360

Query: 361  NMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420
            N RATLIPTIAVPVVLLGTFA+LAAFG+SINTLTMFGMVLAIGLLVDDAIVVVENVERVM
Sbjct: 361  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420

Query: 421  MEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL 480
             E+ LPPKEAT KSM QIQGALVGIAMVLSAVF+PMAFFGGSTGAIYRQFSITIVSAMAL
Sbjct: 421  AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL 480

Query: 481  SVLVALILTPALCATLLKPVS-AEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGR 539
            SVLVALILTPALCAT+LKP++  +H E K GFFGWFN  F+ S +HYT+SVG IL STGR
Sbjct: 481  SVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGR 540

Query: 540  YLLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLK 599
            YL++Y +IV GM  LF+RLPSSFLP+EDQGVF+TM+QLPAGATQERTQKVL++VT YYL 
Sbjct: 541  YLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLT 600

Query: 600  NEKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRD 659
             EK NVESVF VNGF F+G+ QN G+AFVSLK W +R G+EN  EA+  RA     +I+D
Sbjct: 601  KEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD 660

Query: 660  GFVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNG 719
              V  FN+PAIVELGTATGFDFELIDQAGLGH+ LTQARNQLL  AA+HP  L SVRPNG
Sbjct: 661  AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNG 720

Query: 720  LEDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFR 779
            LEDT QFK+++DQEKAQALGVS++DIN T+  A GG+YVNDFIDRGRVKKVYV ++AK+R
Sbjct: 721  LEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYR 780

Query: 780  MLPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDA 839
            MLP+D+   YVR+A+G+MVPFSAF++S W YGSPRLERYNGLPSMEI G+AAPG S+G+A
Sbjct: 781  MLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEA 840

Query: 840  MALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVS 899
            M LME LASKLP G+GYDWTGMSYQERLSGNQAP+L AIS +VVFLCLAALYESWSIP S
Sbjct: 841  MELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFS 900

Query: 900  VMLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGV 959
            VMLVVPLG++G LLAAT     NDVYF VGLLTTIGLSAKNAILIVEFAKDLM+KEGKG+
Sbjct: 901  VMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGL 960

Query: 960  VEATLMAVRMHLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIF 1019
            +EATL AVRM LRPILMTSLAFILGV+PL IS GAGSGAQNAVG GVMGGMV+AT+LAIF
Sbjct: 961  IEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIF 1020

Query: 1020 FVPVFFVVIRRCF 1032
            FVPVFFVV+RR F
Sbjct: 1021 FVPVFFVVVRRRF 1033