Pairwise Alignments

Query, 678 a.a., OM lipoprotein stimulator of MrcA transpeptidase from Escherichia coli BL21

Subject, 603 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  136 bits (342), Expect = 3e-36
 Identities = 158/683 (23%), Positives = 260/683 (38%), Gaps = 109/683 (15%)

Query: 8   RLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINW-Q 66
           RL +A CL  +LAA     C + +P  S   +  T  A     L+Q   +    +    +
Sbjct: 6   RLLSALCLAALLAA-----CAS-SPSSSLGDLPRTPDASIEQLLEQATTAKTPEKAALLR 59

Query: 67  LLAIRALVKEGKTGQAVELFNQLPQE-LNDAQRREKTLLAVEIKLAQKDFAGAQNLL--- 122
           L A     K+   G++ ++  Q+  + L  A +   + LA E+ +A+     A   L   
Sbjct: 60  LSAADMAYKQNNPGRSSQILAQVSLDVLKPAAQVFASTLAAELAMARNQPKAALTALNHP 119

Query: 123 AKITPADLEQNQQARYWQAKIDASQGR-PSIDLLRALIAQEPLLGAKEKQQNIDATWQAL 181
           +  +  DL   QQ R       A +    ++   R  +A  PLL     + N +A W  +
Sbjct: 120 SLQSLKDLPPEQQIRTASVHARAYEADGQTLAAARERVAMAPLLTGDAAKSNHEAIWVLI 179

Query: 182 SSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKML 241
           +++  EQ       +    L GW+ L +         +  +A I  W+ + P +P A  L
Sbjct: 180 AALPAEQLQA----SGNPTLDGWITLAQA-VKGAGTLEQQQAAIDTWRAQNPGHPAAVQL 234

Query: 242 PTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQIAAAPAA 301
           PT L  +                                   K + +QP+       P  
Sbjct: 235 PTPLTKL-----------------------------------KELASQPLTKIALLLP-- 257

Query: 302 DVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIY 361
               Q  P    G A       +    EQ   +P PV                   ++ Y
Sbjct: 258 ----QDGPLASVGKALREGFMAAHYQAEQAGQKP-PV-------------------IEFY 293

Query: 362 DTSS-QPLSQILSQVQQDGASIVVGPLLKNNVEEL-LKSNTPLNVLALNQPENIENRVNI 419
           D+S    L    ++ Q  G  +VVGPL K  V++L  +   P+  LALN  E+  +   +
Sbjct: 294 DSSRLTSLDDFYAKAQAAGVQLVVGPLEKPLVKQLSARPQLPITTLALNYSESDRSPAQL 353

Query: 420 CYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKF 479
             F L+ EDEAR+ +R  R  G      ++PR   G+RV  AF Q+W+  GG  +     
Sbjct: 354 FQFGLAAEDEAREVSRRARADGLHRAAAMVPRGEWGERVYKAFRQDWEANGGQVM----- 408

Query: 480 GSTSELRAGVNGGSGIALTGSPITLRATTDSGMTTNNP-----TLQTTPTDDQFTNNGGR 534
                         G+     P+ L                  +LQ+T   D       R
Sbjct: 409 --------------GVEYVDQPVALAQQIADLFQLRKSEGRAKSLQSTVGTDVAAQPSRR 454

Query: 535 VDA--VYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSE 592
            D   +++  TP     IKP +  +        +YA+S     +   +  L+M  + + E
Sbjct: 455 QDIEFIFLAVTPQLAQQIKPTLNFQYAGD--VPVYATSHVFSASGDKNQYLDMTNVMFCE 512

Query: 593 IPMLAGGNLPLMQQ-ALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGS 651
            P L     PL  Q A      + SL R+YAMGVDA+ LA    Q++ +    ++G +GS
Sbjct: 513 TPWLLNTTDPLRNQVAAQWPQANGSLGRLYAMGVDAYRLAPRLGQLKALPDTRVDGLSGS 572

Query: 652 LTANPDCVINRNLSWLQYQQGQV 674
           L  +    ++R + W ++  G++
Sbjct: 573 LGISTTQRVDRQMPWAKFVGGEI 595