Pairwise Alignments

Query, 244 a.a., membrane spanning protein in TonB-ExbB-ExbD complex from Escherichia coli BL21

Subject, 231 a.a., protein TolQ from Pseudomonas fluorescens SBW25

 Score =  127 bits (318), Expect = 3e-34
 Identities = 74/193 (38%), Positives = 110/193 (56%), Gaps = 5/193 (2%)

Query: 11  SVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQ 70
           S+W +  +A +VV+ VM+ L+ ASV +W + F +S      +R L+  ++       L++
Sbjct: 10  SMWSLVSNASVVVQLVMLTLVAASVTSWVMIFQRSNLLRAGRRALESFEERFWSGIDLSK 69

Query: 71  ANDIAADFGSKSLSLHLLNEAQ----NELELSEGSDDNEGIKERTSFRLERRVAAVGRQM 126
               A         +  +  A     + L    G D  E + E  +  +   ++    ++
Sbjct: 70  LYRQAGSNPDPDSGVEQIFRAGFKEFSRLRQQPGVDP-EAVMEGVARAMRVAISREEEKL 128

Query: 127 GRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLV 186
            +   +LAT+G++SP++GLFGTVWGIMNSF G+AQ Q   LA VAPGIAEAL+ATAIGL 
Sbjct: 129 EQSLPFLATVGSVSPYIGLFGTVWGIMNSFRGLAQAQQATLATVAPGIAEALIATAIGLF 188

Query: 187 AAIPAVVIYNVFA 199
           AAIPAV+ YN FA
Sbjct: 189 AAIPAVIAYNRFA 201