Pairwise Alignments

Query, 244 a.a., membrane spanning protein in TonB-ExbB-ExbD complex from Escherichia coli BL21

Subject, 239 a.a., tolQ protein from Agrobacterium fabrum C58

 Score =  156 bits (395), Expect = 3e-43
 Identities = 95/220 (43%), Positives = 128/220 (58%), Gaps = 5/220 (2%)

Query: 9   DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 68
           D+S+W ++  A  +VK VMIGLI ASV TWAI F K V F   KR+  + +Q+    +SL
Sbjct: 12  DVSLWALFMQAGFIVKFVMIGLIAASVWTWAIVFDKYVSFGKAKRQFDQFEQVFWSGQSL 71

Query: 69  NQANDIAAD---FGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQ 125
            +     A+    G  ++ +  + E +   E   G+    G++ R    ++  +A  G Q
Sbjct: 72  EELYRTLAERQNVGLAAIFVSAMREWKKSFE--RGARSPIGLQMRIDRAMDVTIAREGEQ 129

Query: 126 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 185
                G LATIG+  PF+GLFGTV GIM SF  IA +++TNLAVVAPGIAEALLATAIGL
Sbjct: 130 YEARLGSLATIGSAGPFIGLFGTVVGIMTSFQAIAGSKSTNLAVVAPGIAEALLATAIGL 189

Query: 186 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLD 225
           VAAIPAV+ YN F        A +   A +   + SR +D
Sbjct: 190 VAAIPAVIAYNKFTADAHKLSARMEGFADEFSAILSRQID 229