Pairwise Alignments

Query, 244 a.a., membrane spanning protein in TonB-ExbB-ExbD complex from Escherichia coli BL21

Subject, 340 a.a., biopolymer transport protein from Agrobacterium fabrum C58

 Score =  218 bits (556), Expect = 9e-62
 Identities = 123/220 (55%), Positives = 153/220 (69%), Gaps = 5/220 (2%)

Query: 9   DLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSL 68
           +LS WGM+  AD VVK VMIGL  AS+VTW ++ +KS+E    + R     +++  A++L
Sbjct: 104 NLSPWGMFMAADWVVKGVMIGLAFASLVTWTVWVAKSIELAGARVRAGSTLKVIRRAKTL 163

Query: 69  NQANDIAADFGSKSLSLHLLNEAQNELELSEG---SDDNEGIKERTSFRLERRVAAVGRQ 125
            +A D   + G  +  +  L  A +E++LS+      D  GIKER S  L R     GR+
Sbjct: 164 AEATDAVENKGGPAALM--LRMATHEMQLSDAVVEHTDGGGIKERVSSALSRIETHAGRR 221

Query: 126 MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL 185
           M RG G LATIG+ +PFVGLFGTVWGIMNSFI I+++QTTNLAVVAPGIAEALLATAIGL
Sbjct: 222 MSRGTGALATIGSTAPFVGLFGTVWGIMNSFISISESQTTNLAVVAPGIAEALLATAIGL 281

Query: 186 VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLD 225
           VAAIPAVVIYNVFAR I G++ +L D AA V  L SRDLD
Sbjct: 282 VAAIPAVVIYNVFARSITGYRHLLADAAAGVERLVSRDLD 321