Pairwise Alignments

Query, 311 a.a., dsd operon activator; autorepressor from Escherichia coli BL21

Subject, 316 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  151 bits (381), Expect = 2e-41
 Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 9/296 (3%)

Query: 12  LNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVEL 71
           L    L  +  FE AARH+SF  AA EL  +  A+S +I +LEE+L I+LF R +R +EL
Sbjct: 5   LGDLSLDLLRAFEAAARHRSFTAAAMELGTTQPAISQQIKRLEEQLAIRLFDRIYRGIEL 64

Query: 72  THEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPS 131
           T  G  ++  ++  L  +NQ +  I  Q+    L + +  + A  WL+P L  F +  P 
Sbjct: 65  TDAGALLFEHVQGGLQGINQGLSLITQQDQHEVLQVATDFAFAAYWLMPRLHRFHKANPQ 124

Query: 132 ISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNT 191
           + ++++T   N    R+ ID+A+ F D    Q    +L +EE+ PVCSP++ +      T
Sbjct: 125 VDVSLVTSERNHATLRSDIDVAVLFGDGRFKQGDSLWLFNEEVFPVCSPQWLKDQTTPLT 184

Query: 192 VINLCHCTLLHDRQAWSNDSGTDEWHSWAQHY----AVNLPTSSGIGFDRSDLAVIAAMN 247
           V NL    LLH RQ         +W  W+  +      + PT   + FD   L + AA+ 
Sbjct: 185 VQNLHDFPLLHLRQ-----ENNSQWFDWSGVFRELGIASAPTPGQLRFDNYTLLIQAAIA 239

Query: 248 HIGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFITWL 303
             GVA+G + LV   L  G L  P  D  +    +Y +     R+   +E F+ WL
Sbjct: 240 GQGVAIGWRHLVDNLLEQGWLCRPLSDTVISRFGYYVVQPQRKRRGQLVERFVEWL 295