Pairwise Alignments

Query, 311 a.a., dsd operon activator; autorepressor from Escherichia coli BL21

Subject, 315 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  167 bits (424), Expect = 2e-46
 Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 3/299 (1%)

Query: 10  RLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKV 69
           R L+G     +H F  AARH SF   AEEL ++P AVS +I QLEE LG +LF R  R V
Sbjct: 3   RPLHGQTYVWLHVFSCAARHLSFTRCAEELHITPGAVSQQIRQLEERLGFRLFHRRARGV 62

Query: 70  ELTHEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRY 129
           EL+ EG+R+   +  +  +++ E+  +    +SGTL L S PS    WL P L    +R+
Sbjct: 63  ELSAEGQRLATTVGEAYGSIDAELQRLDAGMISGTLRLRSIPSFLGKWLTPRLPRLQQRF 122

Query: 130 PSISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALT 189
           P I L ++  + ++ L     DLAI  +D     L    L+DE+I PVC+P   +     
Sbjct: 123 PDIQLRMVAEDSSIALHEGDFDLAIDLNDGSYPGLLSTALLDEQIFPVCAPSLLRGRPPL 182

Query: 190 NTVINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAV-NLPTSSGIGFDRSDLAVIAAMNH 248
           +   +L H  LLHD  AW       EW  +       +     G  F+R+ L + AA+  
Sbjct: 183 HGPADLVHFPLLHDITAWRGSYEYAEWEFYLNAIGYHDADVRRGHTFNRNHLTIEAAIAG 242

Query: 249 IGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGR-QWPKIEAFITWLREQ 306
           +GVA+ R+ L+   L  G L+ PFG + V  H+ Y +   PG    P + A   WL E+
Sbjct: 243 MGVAIARRTLLNDELERGTLIVPFG-LAVPNHKRYVLLYAPGALSHPGVRAVHDWLVEE 300