Pairwise Alignments

Query, 311 a.a., dsd operon activator; autorepressor from Escherichia coli BL21

Subject, 300 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  146 bits (369), Expect = 5e-40
 Identities = 90/295 (30%), Positives = 146/295 (49%), Gaps = 8/295 (2%)

Query: 17  LSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVELTHEGK 76
           L  +  FE AAR++S  LA+ EL+++P AVS +I +LE  LG+QLF R  R ++LT EG+
Sbjct: 8   LKGLQAFEAAARYRSVTLASNELNVTPGAVSLQIRELEARLGVQLFFRKPRSIQLTREGE 67

Query: 77  RVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTV 136
           R Y AL+++   + +   ++  +     LTL   P+ A  WL+P L  F +++P + + +
Sbjct: 68  RYYGALRTAFRMMREATAELTARSEITVLTLSCTPTFAVQWLMPRLPSFQQQHPHVDVRI 127

Query: 137 LTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNTVINLC 196
              N  V+  R  +DLA+         L     +D+  LPVC+P+  +++       +L 
Sbjct: 128 SVTNRLVDFSRDDVDLAVRHGFGRYEGLESIRFIDDSTLPVCAPQLLEKYGPLREAGDLK 187

Query: 197 HCTLLHDRQAWSNDSGTDEWHSWAQHY-AVNLPTSSGIGFDRSDLAVIAAMNHIGVAMGR 255
              LLH       D   +EW  W +   A  +  S G  F  S+ A+ AA    G+A+ R
Sbjct: 188 SVPLLH-------DENRNEWRRWLEAAGASEVDASGGTVFIDSNGALDAAKAGHGIALTR 240

Query: 256 KRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFITWLREQVKTT 310
           + LV + L  G L+APFG        ++ +        P +   I W+  Q  +T
Sbjct: 241 RSLVSRELVEGALIAPFGTDMASTLAYFLVYPRRMLDNPDLVTLIDWMLSQAGST 295