Pairwise Alignments

Query, 396 a.a., bicyclomycin/cysteine/sulfonamide efflux transporter from Escherichia coli BL21

Subject, 417 a.a., multidrug effflux MFS transporter from Dickeya dadantii 3937

 Score =  202 bits (514), Expect = 1e-56
 Identities = 124/398 (31%), Positives = 212/398 (53%), Gaps = 22/398 (5%)

Query: 8   SFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFALGQLIYGP 67
           +++++ +L LL  L  ++IDMYLPA+P ++  FG  +G  Q TLS +++G ALGQ I GP
Sbjct: 13  TYSLILLLALLTALDAMAIDMYLPAMPALAMDFGASSGKVQQTLSVFLVGLALGQGICGP 72

Query: 68  MADSFGRKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVVINALMRDIY 127
           + D +GR+  +L G ++F   +V  AL+++I+ L++ RF   L A+A  V   A++ D+Y
Sbjct: 73  LLDRYGRRIPLLAGLVIFIGGSVMAALSSSIEWLMLARFLQALGASAGLVAPRAIVADLY 132

Query: 128 PKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAMIFFLIKE 187
              E +R+ S +M V  IAP++AP++GG++L    W  +FW+L   A L  A + + I+ 
Sbjct: 133 SVAESARIFSLLMQVMMIAPILAPLLGGYLLAHGEWRLVFWVL---AGLGGAGLIWGIR- 188

Query: 188 TLPPERRQPFHIRTTIGN---------FAALFRHKRVLSYMLASGFSFAGMFSFLSAGPF 238
           T+P    +   + +  GN         +     +   ++Y LA G  F  +F ++S+  F
Sbjct: 189 TIPESLSEEKRLASRAGNLSPGNIVRAYVRQLGYGVFMAYTLAGGVIFGSLFVYISSSSF 248

Query: 239 VYIEINHVAPENFGYYFALNIVFLFV-MTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMV 297
           V+ +   + P  F Y FA N V L +   I  +   RR+G   +   G+ I  +  A +V
Sbjct: 249 VFTQSFGLTPAQFSYIFAANAVSLVIGGQISTTLLRRRVGEQRIMMFGIVIHIL--AGLV 306

Query: 298 ISALL---GLGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIG 354
           +S L+    +G W  ++ +A  +G + +V  N  A+ +      AG AS+L G  ++ I 
Sbjct: 307 LSVLILSGWIGLWGYLLLLATAIGALGLVFGNLTALTMAYAGRQAGVASALMGMLQYLIA 366

Query: 355 AIVGALLSLATFNS-AWPMIWSIAFCATSSILFCLYAS 391
           A+VG   S         P++  I  C   ++L C+ AS
Sbjct: 367 ALVGYCASQVLQGPVVLPVV--IVLCGVVAMLLCIMAS 402