Pairwise Alignments

Query, 375 a.a., ribonuclease D from Escherichia coli BL21

Subject, 388 a.a., ribonuclease D from Agrobacterium fabrum C58

 Score =  181 bits (458), Expect = 4e-50
 Identities = 110/370 (29%), Positives = 196/370 (52%), Gaps = 11/370 (2%)

Query: 5   MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPL--GITD 62
           MI T  ALA  C  +     I +DTEF+R  T++P+L L+Q+       L+DPL  GI D
Sbjct: 1   MIETTAALAEACTELAKSEFITIDTEFLRETTFWPELCLVQMASPTLEVLVDPLAKGI-D 59

Query: 63  WSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMV 122
            +P+  ++ +P++ K  HA  +D+E+  ++ G +P P+ DTQ+ A  CG   S  +  +V
Sbjct: 60  LTPMFELMANPNVVKVFHAARQDIEIIYHLGGLIPHPIFDTQVAAMVCGFGDSISYDQLV 119

Query: 123 EEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDE 182
           ++   V +DKS   TDW  RPLTE+Q +YA ADV +L  +   L  + E  G      +E
Sbjct: 120 QKIKNVQIDKSSRFTDWSRRPLTEKQLDYALADVTHLRDVYLSLKAQLEREGRSLWLTEE 179

Query: 183 CRLMQMRRQEVVAPEDAWRDMTNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREE 242
             +++ R    + P+DAW  + +  +  T +LA L+ +A WR R+AR R++  + V++++
Sbjct: 180 MNILESRDTYDMHPDDAWLRLKSRLRKPT-ELAILKFVAAWREREARSRNVPRSRVLKDD 238

Query: 243 HLWSVARYMPGSLGELDSLGL--SGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDM 300
            ++ +A+  P     L  L     G E    G  ++  V  A  LP+E +P+   +    
Sbjct: 239 GIFEIAQQQPKDAEALSRLRTIPKGWERSASGTAIIETVNAALALPKEEMPKAPRHSHAP 298

Query: 301 PGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGE 360
            G   A + +K L+   ++ H ++A+++A+   ++++ +     + +N     ++GWR E
Sbjct: 299 EGSGAAVELLKVLLKLTADKHGVAAKVIANSDDLDKIAS-----EGENATVAALTGWRRE 353

Query: 361 LMAEALHNLL 370
           L  +    L+
Sbjct: 354 LFGDVALKLI 363