Pairwise Alignments

Query, 273 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

Subject, 265 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  145 bits (365), Expect = 1e-39
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 1/221 (0%)

Query: 36  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 95
           H H  G L  A HG +    E   ++ PPQYAVWIP  V HS  +        ++I P  
Sbjct: 36  HSHTWGHLNYAAHGTMQMDTEGLRFLSPPQYAVWIPPKVVHSCTLRHAIVYRSIYIAPGL 95

Query: 96  V-TMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIHVLFDELPQQPQQQLHLPV 154
              +P   CT++ISP+ + ++   A R           RL HV+ D+L     Q+ +LP 
Sbjct: 96  CGRLPAEPCTVRISPIIKSVLADFAARDLHVPRTEADLRLAHVVVDQLALAEVQRCYLPA 155

Query: 155 SSHPKIRAMVEMMAKEPVEWGSLGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 214
           ++ P +  ++E +   P +   L QWA    M+ER LAR   +E G+SF +WRQ+L+ + 
Sbjct: 156 AASPALVGVLEALQAAPGDHRPLAQWADSVHMTERTLARQCQRELGMSFGEWRQRLRFLR 215

Query: 215 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 255
           A+  L  G TVQ++A  LGY + +AFI MF++  G TP +Y
Sbjct: 216 AIDALEAGRTVQEIAFDLGYSTASAFIAMFQREAGTTPEQY 256