Pairwise Alignments

Query, 273 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

Subject, 265 a.a., helix-turn-helix transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  128 bits (321), Expect = 1e-34
 Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 10/253 (3%)

Query: 10  YEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69
           Y+PD            +GT     P H HR+GQ   A  GA+    +   W+VPPQ A+W
Sbjct: 10  YKPDSPEAVVTLREYPSGT---VFPRHTHRRGQFAYASTGALKMFTDLGNWVVPPQRAIW 66

Query: 70  IPGGVEHSNQVTANAELCFLFIEPSAVT---MPTTCCTLKISPLCRELILTLANRTTTQR 126
           +PGGV H   +  +  +   +++ +A     +   C    +SPL R L+   A       
Sbjct: 67  VPGGVSHEMHMRGDVVMLNTYLDDAAARRAGLQDYCQVFGVSPLLRHLLE--AALAIGPS 124

Query: 127 AEPMTRR--LIHVLFDELPQQPQQQLHLPVSSHPKIRAMVEMMAKEPVEWGSLGQWAGFF 184
           A P  R   ++ +L DE+   P+  L  P+ S  ++    +     P +  S+G+ A + 
Sbjct: 125 ASPSVRDCCVLTLLIDEIGTMPELPLSAPLPSESRLARSCQRFLDAPTQKISIGEMADWS 184

Query: 185 AMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMF 244
           +MS R   R   + TG++F  WRQQ+ L+ A   L  G ++  VA  LG+ S++AF ++F
Sbjct: 185 SMSRRTFTRNFRECTGMTFVSWRQQVCLLEATARLSHGSSITDVAFELGFSSSSAFTSVF 244

Query: 245 KKGLGQTPGRYIA 257
           ++ LG +P RY+A
Sbjct: 245 RRNLGDSPARYLA 257