Pairwise Alignments

Query, 340 a.a., autoinducer 2-binding protein from Escherichia coli BL21

Subject, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  587 bits (1512), Expect = e-172
 Identities = 289/340 (85%), Positives = 312/340 (91%)

Query: 1   MTLHRFKKIALLSVLGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60
           M  H  K IALL+  G+A+ +M VQAAERIAFIPKLVGVGFFTSGGNGAQ+AGK LG+DV
Sbjct: 8   MARHSIKMIALLTAFGLASAAMTVQAAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDV 67

Query: 61  TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120
           TYDGPTEPSVSGQVQL+NNFVNQGY+AIIVSAVSPDGLCPALKRAMQRGV++LTWDSDTK
Sbjct: 68  TYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTK 127

Query: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK 180
           PECRSYYINQGTP QLG MLV+MAA QV+K+KAKVAFFYSSPTVTDQNQWVKEAKAKI++
Sbjct: 128 PECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQ 187

Query: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240
           EHPGWEIVTTQFGYNDATKSLQTAEGI+KAY DLDAIIAPDANALPAAAQAAENLK + +
Sbjct: 188 EHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNL 247

Query: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVG 300
           AIVGFSTPNVMRPYV+RGTVKEFGLWDVVQQGKISVYVA+ALLK   M  GD LDI G+G
Sbjct: 248 AIVGFSTPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIG 307

Query: 301 QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340
           +V VSPNS QGY YEA GNGIVLLPERVIFNK+NI KYDF
Sbjct: 308 KVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF 347