Pairwise Alignments

Query, 340 a.a., autoinducer 2-binding protein from Escherichia coli BL21

Subject, 328 a.a., Autoinducer 2-binding protein LsrB from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  103 bits (258), Expect = 5e-27
 Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 20/326 (6%)

Query: 14  VLGIAAISMNVQAAERIAF-IPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSG 72
           +LG A IS  +QAAE++   I K+ G+ +F   G G  +AGK  GV+ +  GP+      
Sbjct: 15  LLGAALISAPLQAAEKVVVNISKVDGMPWFNRMGEGVVEAGKAFGVNASQVGPSSTDAPQ 74

Query: 73  QVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGT 132
           QV++I + + +  NAI +     + L P  K+A   G+ VLT +S  +P   ++ I    
Sbjct: 75  QVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPGQPSA-NWDIEIID 133

Query: 133 PAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH-PGWEIVTTQ 191
             +     V+  A+++   K     +  S TV   N W  +   K  KEH P    VT +
Sbjct: 134 NEKFAAEYVEHMAKRMG-GKGGYVIYVGSLTVPQHNLWA-DLLVKYQKEHYPDMHEVTRR 191

Query: 192 FGYNDAT-KSLQTAEGILKAYSDLDAIIAPDANALPAAAQAA-ENLKNDKVAIVGFSTPN 249
               ++   S +T   ++K Y DL A+++  +N    A +A  E    +KVA+ G   P+
Sbjct: 192 MPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNKVAVYGMMIPS 251

Query: 250 VMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVGQVEVSPNSV 309
                ++ G + E   +D    G     VA  LLK   +K G  L++Q +G+ +V  +  
Sbjct: 252 QAASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPG--LEMQNLGKADVDMD-- 307

Query: 310 QGYDYEADGNGIVLLPERVIFNKENI 335
                      I+   + ++ NK+NI
Sbjct: 308 ---------KRIIRFHKVLLVNKDNI 324