Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease from Escherichia coli BL21

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Serratia liquefaciens MT49

 Score =  202 bits (515), Expect = 7e-57
 Identities = 120/338 (35%), Positives = 189/338 (55%), Gaps = 33/338 (9%)

Query: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFT---GERTLPPEVMANIEAKYHLND 57
           ML+FILRR    IPT   +  ++F  + + PG P T   GER +  E  A + A+  L+ 
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVTIMAGERGISAERHAQLMAEMGLDK 60

Query: 58  PIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGV 117
           P+  QYFSY+  +  GD G S K +  SV D     F  + +LG  A   AV++G+  GV
Sbjct: 61  PLYQQYFSYVSNVLQGDLGTSLKSR-ISVWDEFVPRFKATLELGFCAMIFAVLVGIPVGV 119

Query: 118 IAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGG------------ 165
           +AA+++ + +D+T +G+++TG  +P F    +L+M+ ++ L+  P  G            
Sbjct: 120 LAAVRRGSIFDHTAVGISLTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVSDTVFLDDTL 179

Query: 166 ------------WN-----GGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRT 208
                       W        A+  MILP + L    +A I R+TR SM+EVL  ++IRT
Sbjct: 180 PLTGFMLIDTLIWGEPGDFADAVMHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239

Query: 209 ARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGAL 268
           ARAKG+   R+I+ HAL+ ALLPV++ +G     ++ G+++ ETI+  PG+G+  ++   
Sbjct: 240 ARAKGVSRMRVIVVHALRNALLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLMDALQ 299

Query: 269 NRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY 306
            RDY +V    +LV  + IL N +VDVLY V++P+IR+
Sbjct: 300 RRDYPVVQGGVLLVACMIILVNLLVDVLYGVVNPRIRH 337