Pairwise Alignments

Query, 513 a.a., sodium:proton antiporter from Escherichia coli BL21

Subject, 494 a.a., Na+ or Li+/H+ antiporter NhaB from Pseudomonas sp. S08-1

 Score =  596 bits (1537), Expect = e-175
 Identities = 302/492 (61%), Positives = 377/492 (76%), Gaps = 3/492 (0%)

Query: 8   ALWRNFLGQSPDWYKLALIIFLIVNPLI-FLISPFVAGWLLVAEFIFTLAMALKCYPLLP 66
           AL  NFLG SP WYKL ++ FL+ NPL+ +   P  AGWLLV EFIFTL MALKCYPLLP
Sbjct: 4   ALAHNFLGSSPSWYKLTILFFLLANPLVLWAAGPVAAGWLLVGEFIFTLGMALKCYPLLP 63

Query: 67  GGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFMVAGIYFMKQLLLFIFTRLLLSIRS 126
           GGLL ++A+ +G+ + + + EE+A N  V+LLLMFMVAGIYFMK LLLF+F+RLLL +RS
Sbjct: 64  GGLLVLQAILLGLATPKALYEELAHNFPVILLLMFMVAGIYFMKDLLLFLFSRLLLGVRS 123

Query: 127 KMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSR-TEDTDLQDDSHID 185
           K LL+L FC+ +AFLSAFLDALTV AV+I+  +GFY +YHRVAS R  +D +  +   ++
Sbjct: 124 KALLALLFCLLSAFLSAFLDALTVTAVIIAATLGFYAVYHRVASGRGAQDEEFLEAEAVE 183

Query: 186 KHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGDFFLRMSPV 245
            H +  LEQFR FLRSL+MH  VGTALGGV T+VGEPQNL+I    GW+F DFFLR++PV
Sbjct: 184 LH-REDLEQFRAFLRSLLMHGAVGTALGGVCTLVGEPQNLLIGHEMGWNFADFFLRVAPV 242

Query: 246 TVPVLICGLLTCLLVEKLRWFGYGETLPEKVREVLQQFDDQSRHQRTRQDKIRLIVQAII 305
           ++PVL  GL TC+L+E+L WFGYG  LP  VR+VL +  + S  QRT + +  L+VQ + 
Sbjct: 243 SIPVLAAGLATCVLLERLGWFGYGAQLPASVRQVLAEHANASDAQRTPEQRAALLVQGLA 302

Query: 306 GVWLVTALALHLAEVGLIGLSVIILATSLTGVTDEHAIGKAFTESLPFTALLTVFFSVVA 365
            V L+  LALH+AEVGLIGLSVI+L T+ +G+TDEH IG+AF ++LPFTALL  FF+VVA
Sbjct: 303 AVLLIIGLALHVAEVGLIGLSVIVLITAFSGITDEHRIGRAFQDALPFTALLVTFFAVVA 362

Query: 366 VIIDQQLFSPIIQFVLQASEHAQLSLFYIFNGLLSSISDNVFVGTIYINEAKAAMESGAI 425
           VI  QQLF+P+IQ VL      Q  + +I NGLLS+ISDNVFV TIYI E K A  +G +
Sbjct: 363 VIQQQQLFTPLIQAVLALPAEQQPGMLFIANGLLSAISDNVFVATIYITEVKQAFLAGNM 422

Query: 426 TLKQYELLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVL 485
           T + +E LAVA+NTGTNLPSVATPNGQAAFLFLLTS++APLIRLSYGRMVWMALPYT+V+
Sbjct: 423 TREHFEALAVAVNTGTNLPSVATPNGQAAFLFLLTSSIAPLIRLSYGRMVWMALPYTIVM 482

Query: 486 TLVGLLCVEFTL 497
             +G   V + L
Sbjct: 483 GGLGWWAVSYWL 494