Pairwise Alignments

Query, 672 a.a., poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein from Escherichia coli BL21

Subject, 236 a.a., Biofilm PGA synthesis deacetylase PgaB (EC 3.-) from Variovorax sp. SCN45

 Score =  174 bits (441), Expect = 4e-48
 Identities = 103/259 (39%), Positives = 147/259 (56%), Gaps = 32/259 (12%)

Query: 284 LDSIPRVLIANNPSLKEFAQQIITVQEKSPQRIMHIDLDYVYDENLQQMDRNIDVLIQRV 343
           L  + R+L+ +NP++++   ++    E    R + IDLDYVYD++  Q  RN+D LI+R+
Sbjct: 9   LHGLARLLVFDNPTVQDLTFELRHDTELDGVRALQIDLDYVYDKDPAQQARNLDKLIERI 68

Query: 344 KDMQISTVYLQAFADPDGDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWMPV 403
           K +  S V+LQAFADPDG+G    ++FPNR LPM+AD+F+RVAWQ++TR+   ++AW+PV
Sbjct: 69  KQVGPSHVFLQAFADPDGNGSADALYFPNRQLPMRADLFNRVAWQIKTRAHAKVFAWLPV 128

Query: 404 LSWDLDPTLTRVKYLPTGEKKAQIHPEQYHRLSPFDDRVRAQVGMLYEDLAGHAAFDGIL 463
           L ++L       K L         +P + HRL+PFD R R  V  +YEDLA     +G+L
Sbjct: 129 LGYELPD-----KALDAQLAIKSSNPAETHRLNPFDPRTREIVAQVYEDLAISGYTEGLL 183

Query: 464 FHDDALLSDYE-DASAPAITAYQQAGFSGSLSEIRQNPEQFKQWARFKSRALTDFTLELS 522
           FHDDA L D E    APA  A                          +++AL DFT EL+
Sbjct: 184 FHDDAFLRDDELRGVAPAAPA-------------------------ARTQALIDFTQELT 218

Query: 523 ARVKAIRGPHIKTARNIFA 541
                 R P + T RN+FA
Sbjct: 219 RAAGKWR-PKLITVRNLFA 236