Pairwise Alignments

Query, 597 a.a., hydrogenase 1, large subunit from Escherichia coli BL21

Subject, 567 a.a., hydrogenase 2 large subunit from Escherichia coli ECOR38

 Score =  474 bits (1219), Expect = e-138
 Identities = 253/591 (42%), Positives = 360/591 (60%), Gaps = 38/591 (6%)

Query: 17  RRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIILQGRDPRDAWAFVERIC 76
           +R+ +DP+TRIEGH+R +  I +  V++ A + GTM+RG+E I++ RDPRDAW  V+RIC
Sbjct: 3   QRITIDPVTRIEGHLRIDCEI-ENGVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRIC 61

Query: 77  GVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLD 136
           GVCT  HAL+SV A E A+ I VP NA  IRNI+LA    HDH+VHFYQL+ +DW+D+  
Sbjct: 62  GVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALDWVDITS 121

Query: 137 ALKADPRKTSELAQSLSSWPKSSPGYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPP 196
           AL+ADP K SE+ + +S+W  +SP  F  VQN++K  V  GQLGIF NGYWGHP  KLPP
Sbjct: 122 ALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVASGQLGIFANGYWGHPAMKLPP 181

Query: 197 EANLMGFAHYLEALDFQREIVKIHAVFGGKNPH-PNWIVGGMPCAINIDESGAVGAVNME 255
           E NL+  AHYL+AL+ QR+  ++ A+ GGK PH  N  VGG+   IN+D    +G +N+E
Sbjct: 182 EVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNLAVGGVANPINLD---GLGVLNLE 238

Query: 256 RLNLVQSIITRTADFINNVMIPDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFG 315
           RL  ++S I + +DF+  V   D   I  F   W   G G      ++Y + P+   D  
Sbjct: 239 RLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRGKG-----AVNYLSVPEFPTDSK 293

Query: 316 EKSLLMPGGAVINGDFNNVLPV----DLVDPQQVQEFVDHAWYRYPNDQVGRHPFDGITD 371
             S L PGG + N D ++  P+    D    + +QE   H+WY+   D+  + P++G T 
Sbjct: 294 NGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHSWYK---DEAPQAPWEGTTI 350

Query: 372 PWYNPGDVKGSDTNIQQLNEQERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAAT---- 427
           P Y+     G            +YSW+K+P + G  +EVGPLA  L+    G  +T    
Sbjct: 351 PAYDGWSDDG------------KYSWVKSPTFYGKTVEVGPLANMLVKLAAGRESTQNKL 398

Query: 428 --VESVDRMMSALNLPLSGIQSTLGRILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATA 485
             + ++ + ++   L ++ + STLGRI+ R          LQ  +  L+TN+  G+  T 
Sbjct: 399 NEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNIGKGD-HTT 457

Query: 486 STEKWEPATWPTECRGVGFTEAPRGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQI 545
             +   PAT   E +GVGF EAPRG L HW  I+DG I  YQ VVP+TWN+ PR+    +
Sbjct: 458 FVKPNIPAT--GEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGPRNFNDDV 515

Query: 546 GAYEAALMNTKMAIPEQPLEILRTLHSFDPCLACSTHVLGDDGSELISVQV 596
           G YE +L+ T +A P +PLE++RT+HSFDPC+AC+ HV+  DG+E++SV+V
Sbjct: 516 GPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV 566