Pairwise Alignments

Query, 252 a.a., deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx from Escherichia coli BL21

Subject, 252 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 5/250 (2%)

Query: 4   RREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLL---GGYIVLEP 60
           ++ +R   +++ +K+   +  ++      VS  TIRRDLN  +   ++L   GG  +  P
Sbjct: 2   KQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILRHHGGAAL--P 59

Query: 61  RSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAV 120
            S+ +    D+K+   EEK R A+  A  +    TLF D GTT   +  A+ N      V
Sbjct: 60  SSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRIV 119

Query: 121 CYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSK 180
             +LN    L  K   R  L GGE  + +           ++ F  D      +G+    
Sbjct: 120 TNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDG 179

Query: 181 GATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYV 240
               F+  E+  K   +  ++  +LVVDHSKFG+     MG +   D V +D  P    +
Sbjct: 180 SLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDAPPPVSVM 239

Query: 241 KYAQTQRIKL 250
           +      I+L
Sbjct: 240 QVLTDHHIQL 249