Pairwise Alignments

Query, 252 a.a., deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx from Escherichia coli BL21

Subject, 269 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 4/234 (1%)

Query: 3   TRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDL---NNHSAPVVLLGGYIVLE 59
           T   ER  Q++Q L++   + + D +AL GVS +TIR DL         V   GG ++ +
Sbjct: 13  TGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGIAVRAYGGALICD 72

Query: 60  PRSASHYLLSDQKSRL-VEEKRRAAKLAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFT 118
             + S     + KS L    KR  AK A  L++P   +  D GTTT  I   +       
Sbjct: 73  STTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFEIARLMRKHTDVI 132

Query: 119 AVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHV 178
           A+   +N   AL E       + GG     +  F     +Q+L N+  D+ F     + +
Sbjct: 133 AMTNGMNVANALLEAEGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAIDL 192

Query: 179 SKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSD 232
            +G +  N +E  +      +A++ ++V D SKF +    ++ D +R D+++ D
Sbjct: 193 ERGVSTHNEDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRIDMIIVD 246