Pairwise Alignments

Query, 368 a.a., putative ABC transporter permease from Escherichia coli BL21

Subject, 376 a.a., ABC transport system, permease component YbhS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  146 bits (369), Expect = 8e-40
 Identities = 84/336 (25%), Positives = 176/336 (52%), Gaps = 5/336 (1%)

Query: 2   FHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHS 61
           + R+  L  KE + ++R+P +  I ++  L+ + +F +   L+ +   + I  E   + +
Sbjct: 7   WRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQQSQEA 66

Query: 62  VELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTF-QTAPLQLI 120
           ++ T      S +    +  +  E+   +   +   LV  P DF++++     +AP+Q+I
Sbjct: 67  LDFTHAMT-GSPYIDATISDNRHELIEKMQAGRIRGLVVIPVDFAQQMARDGDSAPIQVI 125

Query: 121 LDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNS--ELVVRNWYNPNLDYKWFVVPS 178
            DG   N+A     Y++ I + +QQ+  E +        ++  R W+NP    + F++P 
Sbjct: 126 TDGSEPNTANFVQGYVEGIWQIWQQQRAEDRGDTFEPLIDVQTRYWFNPAAISQHFIIPG 185

Query: 179 LIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVL 238
            + +I T+   I+TSL VARE E+GT++ LL + +T  ++ + K +P   +      + +
Sbjct: 186 AVTIIMTVIGAILTSLVVAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGMLAMLLCM 245

Query: 239 AIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQ-QQAFIGVFVFMMPAIL 297
            + ++   +P+ GSL + +    ++ LS +G GLLIS++   Q   A + +    +P+I+
Sbjct: 246 LVSVFILGVPYRGSLVILFIITSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIM 305

Query: 298 LSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYL 333
           LSG++  +++MP  ++ +T+I P R+F    + ++L
Sbjct: 306 LSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFL 341