Pairwise Alignments

Query, 1048 a.a., exonuclease, dsDNA, ATP-dependent from Escherichia coli BL21

Subject, 1047 a.a., exonuclease subunit SbcC from Escherichia coli ECRC99

 Score = 1993 bits (5163), Expect = 0.0
 Identities = 1030/1048 (98%), Positives = 1035/1048 (98%), Gaps = 1/1048 (0%)

Query: 1    MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60
            MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
Sbjct: 1    MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR 60

Query: 61   LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120
            LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
Sbjct: 61   LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA 120

Query: 121  DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180
            DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
Sbjct: 121  DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE 180

Query: 181  IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQ 240
            IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQ
Sbjct: 181  IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQ 240

Query: 241  QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300
            QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA
Sbjct: 241  QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA 300

Query: 301  EHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360
            EHSAALAHTRQQIEEVNTRLQ+TMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ
Sbjct: 301  EHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ 360

Query: 361  WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE 420
            WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITL LTADEVATALAQHAE
Sbjct: 361  WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLMLTADEVATALAQHAE 420

Query: 421  QRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV 480
            QRPLRQ LVALHGQIVPQQKRLAQL V IQNVT EQTQRNAALNEMRQRYKEKTQQLADV
Sbjct: 421  QRPLRQRLVALHGQIVPQQKRLAQLMVTIQNVTLEQTQRNAALNEMRQRYKEKTQQLADV 480

Query: 481  KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540
            KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK
Sbjct: 481  KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK 540

Query: 541  KLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQP 600
            KLGEEGA LRGQLDA+TKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQP DDIQP
Sbjct: 541  KLGEEGAALRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP 600

Query: 601  WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQE 660
            WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQ LLT L GYALTLPQE
Sbjct: 601  WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE 660

Query: 661  DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWR 720
            DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSD+LPH EETV L+NWR
Sbjct: 661  DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDDLPHSEETVALDNWR 720

Query: 721  QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780
            QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT
Sbjct: 721  QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT 780

Query: 781  QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLR 840
            QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP DGLALTVTVEQIQQELAQTHQKLR
Sbjct: 781  QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRP-DGLALTVTVEQIQQELAQTHQKLR 839

Query: 841  ENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 900
            ENTTSQGEIRQQLKQDADNRQQQQTL+QQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ
Sbjct: 840  ENTTSQGEIRQQLKQDADNRQQQQTLLQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQ 899

Query: 901  GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 960
            GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS
Sbjct: 900  GLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVS 959

Query: 961  LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1020
            LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM
Sbjct: 960  LALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAM 1019

Query: 1021 KERIPVQIKVKKINGLGYSKLESTFAVK 1048
            KERIPVQIKVKKINGLGYSKLESTFAVK
Sbjct: 1020 KERIPVQIKVKKINGLGYSKLESTFAVK 1047