Pairwise Alignments

Query, 394 a.a., L-arabinose-inducible putative transporter, MFS family from Escherichia coli BL21

Subject, 389 a.a., Inner membrane transport protein YdhP from Pseudomonas sp. DMC3

 Score =  226 bits (577), Expect = 7e-64
 Identities = 131/389 (33%), Positives = 218/389 (56%), Gaps = 11/389 (2%)

Query: 1   MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIAL 60
           M   +L+LA+  FG+G  EF IMG+L ++A ++ +SIP AG +I+ YALGVV GAPI+A+
Sbjct: 1   MPLALLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPHAGLLITGYALGVVFGAPILAI 60

Query: 61  FSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKII 120
            ++    K  LL +  + ++GN +  L+ +Y  L   R+V+   HGAFFG+G++V + ++
Sbjct: 61  GTANMPRKATLLGMTLMFILGNVLCALAPNYATLMAARVVTALCHGAFFGIGSVVAAGLV 120

Query: 121 KPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPD 180
            P K   A+A M +G+T+AN+LG+PLGT L Q   WR TF  ++V  I    + + W+P 
Sbjct: 121 APNKRAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGIVAALAQWLWLPK 180

Query: 181 ICDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFI 240
                K NL  +F  L      L    ++  +  +F+ F+Y+ P +  I+G S   +T +
Sbjct: 181 HIAMDKANLASEFKVLGKANVLLALGMSVLASTSLFSVFTYIAPILQDITGVSPHGVTVM 240

Query: 241 MMLVGLGMVLGNMLSGRIS-GRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFIC 299
           ++L G+G+  G+ML GR++  R  P  +      +++LA           + ++I A I 
Sbjct: 241 LLLFGVGLTAGSMLGGRLADSRLLPSLVGVALAVVVILAAF------SQTSRAVIPAAIT 294

Query: 300 CA--GL--FALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLGLAYN 355
               G+  FAL   LQ+L++  A     LG+   Q AFNLG+A GA+ GG+++  G    
Sbjct: 295 LVLWGIFAFALCPILQLLIIDQAHEAPNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLA 354

Query: 356 YVALPAALLSFAAMSSLLLYGRYKRQQAA 384
            +    AL+    + + LL+   +R++A+
Sbjct: 355 DLPWTGALVGVLTVLTALLFIYLQRRRAS 383